Thermus sp. CCB_US3_UF1: TCCBUS3UF1_10850
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Entry
TCCBUS3UF1_10850 CDS
T01866
Name
(GenBank) hypothetical protein
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
thc
Thermus sp. CCB_US3_UF1
Pathway
thc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TCCBUS3UF1_10850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thc03400
]
TCCBUS3UF1_10850
DNA repair and recombination proteins [BR:
thc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TCCBUS3UF1_10850
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
TCCBUS3UF1_10850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AEV16130
LinkDB
All DBs
Position
complement(1064856..1065515)
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AA seq
219 aa
AA seq
DB search
MERYRLEEGLVVGRKALPQGDLLLRFVTPKGSLEALAKKGLRPTGRSGRLSLFHHVRFQV
YAKGEGLPTLTQAELVGRLHGLEEPRRFLLASFLAELAYRLASPEAAPRLYPVLVSGLRG
IAKHPEPLLPLVWAGWRVVKAGGLAPSLLGPGLHLQGGRLGEEGVYLGEKGVEALRAILH
LPGGEALAYLEEAPLERLFLALKGHAEEALGPLRSALAL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
gtggagcgctaccggctagaggaggggctggtggtggggcggaaggcccttccccaaggc
gacctcctcctgcgcttcgtcacgcccaaggggagcctcgaggccctggcgaaaaagggc
cttaggcccacggggcgctcggggcggctttccctcttccaccacgtccgcttccaggtt
tacgccaagggcgagggcctgcccaccctgacccaggcggagctggtgggccgcctccac
ggcctggaagaaccccggcgcttcctcctggcctccttcctggccgagctggcctaccgc
ctggcctcccccgaggccgcccctaggctctaccccgtcctggtctcgggcctgcggggc
atcgccaagcaccccgagcccctccttcccctggtctgggcgggctggcgggtggtgaag
gccgggggcctggccccaagcctcctggggccgggcctccacctccagggggggcggctg
ggggaggaaggggtttacctgggggagaagggggtggaggccctaagggccatcctccac
ctccccgggggggaggccctggcctacctggaagaagcccccctggaaaggctcttcctg
gccctgaagggccacgcggaggaagcccttggccccttgcgcagcgccctagccctatag
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