Thermus sp. CCB_US3_UF1: TCCBUS3UF1_12740
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Entry
TCCBUS3UF1_12740 CDS
T01866
Name
(GenBank) Extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
thc
Thermus sp. CCB_US3_UF1
Pathway
thc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
thc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TCCBUS3UF1_12740
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thc02000
]
TCCBUS3UF1_12740
Transporters [BR:
thc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
TCCBUS3UF1_12740
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AEV16317
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Position
complement(1268843..1270405)
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AA seq
520 aa
AA seq
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MRRWLWWLVVALGLAWAQDRTQILVYGGDWTDLITLDPQVVYEFSGVMIADNLYETLVRF
EGNDLSTLRPGLAESWKVERGTTDWILTFKLRRGSKFSTGREVTAKDVVFSFERALALKG
PGSFLFTNIAQLKPGATKALDPYTVEVRIPKAASPQSFLAILTFTIGGIVDSEEAQRNAK
GGDFGKDFLTNNSAGSGPYRLVRWERGNQVILEANPHARIKPKVPRVVLRYIQEPAVLRT
ALESGEIDIAEGLTPEAVRALAANPRFKVVRAETLRLQYLAMNMKAGSPFANPKVREAVR
WAVNQDELIQGLLQGNALKVQTLIPKGLLGHNPTAPYKYDPERAKRLLAEAGYPQGLEFE
LLANTGICGGGVPCPDVAAKLQADMAKAGLRARIRTIPNAELLATYRAQNHQMVLVAWSP
DFPDPDGNATPWSDYAARSLAWRNSYEDEVAAKLARQAALEVEAEKRKALYRLLTEKVLR
EGPYVVLYQPLLPIGLSAKVEGFLKNPMMSVPLWQVGKQP
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgctggctatggtggttggtggtggccttgggtttggcctgggcccaggatcgg
acccagatcctggtttatggcggggactggacggacctcatcaccctggatccccaggtg
gtctacgagttcagcggggtgatgatcgccgataacctctacgaaaccctggtgcgtttt
gaagggaatgacctctccaccctgcggcctggcctggcggagagctggaaggtggagcgg
ggtaccacggactggatccttaccttcaagctccgccgggggagcaagttttccaccggc
cgggaggtgacggccaaggacgtggtctttagctttgagcgggccctggccctcaaggga
ccgggttccttcctcttcaccaacatcgcccagctcaaaccgggggccaccaaggccctg
gatccctacaccgtggaggtgcgcattcccaaagccgcttcccctcagtccttcctcgcc
atcctcaccttcaccatcgggggcatcgtggactcggaggaggcacaaaggaacgccaag
ggaggtgacttcggcaaggacttcctcaccaataactccgccggctccggcccctaccgt
ctggtgcgctgggagcgggggaaccaggtgatcctcgaggccaatccccacgcccgcatc
aagcccaaggtgccacgggtggtgctgcgctacattcaggaaccggctgtgctccgcacc
gccctggagtctggggagatcgacatcgccgaggggctcacccccgaggccgtgagggct
ctggccgctaacccccgcttcaaggtggtgcgggccgaaaccctgcgcctccagtacttg
gccatgaacatgaaggcgggaagccccttcgccaaccccaaggtccgggaggcggtgcgc
tgggcggtaaaccaggatgaactcatccaggggcttctccaggggaacgccctgaaggtg
caaacccttatccccaaaggtcttctgggccataaccccactgctccctacaagtacgat
cccgagcgggccaagcgcctcctggctgaagcgggttatccccagggtttggagtttgag
ctcttggccaatacgggcatctgcggcggaggcgtgccctgccccgatgtggccgccaag
ttgcaggccgatatggccaaggctggccttcgggctcgcatccgcaccatccccaacgcg
gagctcctcgccacctatcgggcccagaaccaccagatggtcctggtggcctggagcccc
gatttccctgaccccgatggcaacgccacgccttggtcggactacgcggcgcgctccctg
gcctggcgcaacagctacgaggacgaggtggccgccaagctggcccgccaggcggccctc
gaggtggaggctgagaagcgcaaggccctgtacaggcttctcacggaaaaggttctccgg
gaaggtccctacgtcgtcctgtaccagccccttttgcccataggcctctcggccaaggta
gagggcttcttgaagaaccccatgatgtccgtgcccctttggcaggtgggcaagcaaccc
tag
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