Thermus sp. CCB_US3_UF1: TCCBUS3UF1_16180
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Entry
TCCBUS3UF1_16180 CDS
T01866
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
thc
Thermus sp. CCB_US3_UF1
Pathway
thc03030
DNA replication
thc03430
Mismatch repair
thc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TCCBUS3UF1_16180
03430 Mismatch repair
TCCBUS3UF1_16180
03440 Homologous recombination
TCCBUS3UF1_16180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thc03032
]
TCCBUS3UF1_16180
03400 DNA repair and recombination proteins [BR:
thc03400
]
TCCBUS3UF1_16180
Enzymes [BR:
thc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TCCBUS3UF1_16180
DNA replication proteins [BR:
thc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TCCBUS3UF1_16180
DNA repair and recombination proteins [BR:
thc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TCCBUS3UF1_16180
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_gamma3
GGDEF_2
DNA_pol3_delt_C
Hda_lid
T2SSK
Motif
Other DBs
NCBI-ProteinID:
AEV16659
LinkDB
All DBs
Position
1618003..1618911
Genome browser
AA seq
302 aa
AA seq
DB search
MVIAFTGDPFLAREALLEEARLRGLSRFTEPTPEALAEALTPGLFGGAGAMLDLREVGEG
EWKALKPLLEGVPEGVPVLLLDPRPTPARAAFYRGRERRDFPTPRGKDLLRHLEGRAKRL
GLKLPAGVVQYLASLEGDLEALERELEKLALLAPPLTLEKVERVVALRPPVTGFDLVRAA
LEGNAPEALRRLQRLKEEGEEPLKLLGAFAWQVALLARAWMLLGETPRPKEEDLARLEAH
PYAARRALEMARGLGKEGLRQALDTLIAAERRAKEGKDPWLALEGAVLALAGLSLTRGSG
PG
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggtcatcgccttcaccggcgacccctttttggcccgggaggccctcctggaggaggcc
cggctccgcgggctttcccgcttcaccgagcccaccccggaggccctggccgaggccctc
accccggggcttttcggcggggcgggggccatgctggacctgagggaggtgggggaaggg
gagtggaaggccctgaagcccctcctggaaggggtgccggaaggggtgcccgtcctcctc
ctggaccccaggcctacccctgcccgggcggccttctaccggggaagggagcggcgggac
ttccctacccccaggggcaaggacctcctgcgccacctggagggccgggccaagcggctt
gggcttaagctgcccgcgggggtggtgcagtacctggcctccctggagggggacctcgag
gccctggagcgggagctggagaagctggccctcctcgcccctcccctcaccctggagaag
gtggaaagggtggtggccctaaggcccccagtgacggggtttgacctggtgcgggccgcg
ctggaggggaacgcccccgaggccctgcgccgcctccagcgcctcaaggaggagggggag
gagccccttaagctccttggggccttcgcctggcaggttgccctcctggcccgggcctgg
atgctcctgggggaaacccccaggcccaaggaggaggacctggcccgcctcgaggcccac
ccctacgccgccaggcgggccctggagatggcccgggggctggggaaggaggggctccgc
caggccctggacaccctgatcgccgccgaaaggcgggccaaggagggaaaggacccctgg
ctggccctggaaggggcggtcctggccctggccggcctgtccttgacccgcgggtcaggg
cctgggtag
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