Thermus sp. CCB_US3_UF1: TCCBUS3UF1_16880
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Entry
TCCBUS3UF1_16880 CDS
T01866
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
thc
Thermus sp. CCB_US3_UF1
Pathway
thc00061
Fatty acid biosynthesis
thc00071
Fatty acid degradation
thc01100
Metabolic pathways
thc01212
Fatty acid metabolism
thc02024
Quorum sensing
thc04146
Peroxisome
Module
thc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
thc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
TCCBUS3UF1_16880
00071 Fatty acid degradation
TCCBUS3UF1_16880
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
TCCBUS3UF1_16880
09145 Cellular community - prokaryotes
02024 Quorum sensing
TCCBUS3UF1_16880
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
thc01004
]
TCCBUS3UF1_16880
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
thc04147
]
TCCBUS3UF1_16880
Enzymes [BR:
thc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
TCCBUS3UF1_16880
Lipid biosynthesis proteins [BR:
thc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
TCCBUS3UF1_16880
Exosome [BR:
thc04147
]
Exosomal proteins
Exosomal proteins of breast milk
TCCBUS3UF1_16880
Exosomal proteins of breast cancer cells
TCCBUS3UF1_16880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AEV16729
LinkDB
All DBs
Position
complement(1685688..1687622)
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AA seq
644 aa
AA seq
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MKALRPSYEMKAYTLPQLLRRRALEEGDRVALREKDYGIWNEITYAEYYEKVLLFAHGLL
SLGFAPGERLAIIADNIPEWLYAELGAQAVRGISVGVYQSSLPAEIAYMLTYTGASIVVA
EDQEQVDKLYEIRNEIPQVRHVIYEDPKGMRGYRDPWLLSFEEVLERGREHRRRHPEAVE
KLLLSASPEEVCHLSSTSGTTGRPKAAMLRHRNLIHMGVALQEVDPLLPTDDYLSFLPLA
WIGEQMMSVAMALTGGFAVNFPEAVETAMQDLKEIGPHVMFSPPRVWESIQSQIWVRMSE
SYAFNRFVYERLLRVGYRAAEYRMRGKPMPLGLRLAYWLADQVLFKPLRDQLGFLRLRRA
YTGGAALGPDVFRFFHAIGVNLKQIYGQTEIIGIAFVHRDGDVRHDTVGLPIPGTEVRIS
EEGEILCRSDAVCAGYWERPEATAETFRDGWLHTGDAGYLTEDGHLVVIDRLSDVMRTQG
GTAFSPQFVENKLKFSPYIKEAVVFGDRKPYLAAFINIDPQTVGKWAEDRGLAYTTYLDL
SLKPEVAALVRQEVERVNGELPEELKIRRFVLLYKLLDADDEELTRTGKVRRGLIAKKYA
PLVEALYSGTKEVEVEAEYRYQDGTVQRVRAQVPVLDLGTEVLA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggccttaaggccctcctatgagatgaaggcctacaccctgccccagctcctccgc
cgccgggccttggaggaaggggaccgggtggccttgcgggagaaggactacggtatctgg
aatgagatcacctacgccgagtactacgagaaggtccttctcttcgcccacggcctcctc
tccttgggctttgcccccggggagcgcctggccatcatcgccgacaacatccccgagtgg
ctctacgccgagcttggggcccaagcggtccggggcatcagcgtgggggtctaccagagc
tccctgcccgcggagatcgcctacatgctcacctacaccggcgccagcatcgtggtggcc
gaggaccaggagcaggtggacaagctttacgagatccgcaacgagatcccccaggtgcgc
cacgtcatctacgaggaccccaaggggatgcggggctaccgggacccctggctcctctcc
tttgaggaggtattggagcggggccgggagcaccggaggcgccaccctgaggcagtggag
aagcttctcctctcggccagccccgaagaggtctgccacctctcctccacctcgggcacc
acgggccggcccaaggcggccatgctccgccaccgcaacctgatccacatgggggtggcc
ctgcaggaggtggacccccttctccccaccgacgactacctctccttcctccccctggcc
tggatcggggagcagatgatgtcggtggccatggccctcaccgggggcttcgccgtgaac
ttccccgaggctgtggaaaccgccatgcaggacctcaaggagatcggcccccacgtgatg
ttcagccccccaagggtgtgggagagcatccagagccagatctgggtgcggatgtcggaa
agctacgccttcaaccgcttcgtttacgagcgccttctccgggtgggctaccgggcggcg
gagtaccgcatgcggggaaagcccatgcccctagggttgcgcctggcctactggctggcg
gaccaggtgcttttcaagcccctgcgggaccagctgggcttcttgcgcctgcggcgggcc
tataccggtggggcggccctgggtccagatgttttccgtttcttccacgccatcggggtc
aacctgaagcagatctacggccagaccgagatcatcggcatcgccttcgtccaccgggat
ggggacgtgcgccacgataccgtgggcctgcccatcccggggaccgaggtgcgcatcagc
gaggagggggagatcctctgccgttcggatgcggtgtgcgccggatactgggagaggccc
gaggccacggcggaaaccttccgcgacggctggctccacaccggggatgcgggctacctc
acggaggatggccacctggtggtcatcgaccgcctctcggacgtgatgcgcacccagggg
gggacggccttcagcccccagttcgtggagaacaagctcaagttctccccctacatcaag
gaggccgtggtcttcggtgaccgcaagccctatttggcggccttcatcaacattgatccc
cagacggtgggcaagtgggcggaggaccggggcctggcctacaccacctacctggacctc
tccctcaagcccgaggtggccgccctggtgcgccaggaggtggagcgggtgaacggggag
ctcccggaggagctaaagatccgccgctttgtcctcctctacaagctcctagacgcagac
gacgaggagcttacccgcacgggcaaggtgcggcgggggctcatcgccaaaaagtatgcc
cccctggtggaggccctttactccgggaccaaggaggtggaggtggaggcggagtaccgc
taccaagacggtaccgtgcagcgggtgcgggcccaggtgcccgttttggatctggggacg
gaggtgttggcgtga
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