Thermus sp. CCB_US3_UF1: TCCBUS3UF1_17030
Help
Entry
TCCBUS3UF1_17030 CDS
T01866
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
thc
Thermus sp. CCB_US3_UF1
Pathway
thc03420
Nucleotide excision repair
thc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TCCBUS3UF1_17030
03430 Mismatch repair
TCCBUS3UF1_17030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thc03400
]
TCCBUS3UF1_17030
Enzymes [BR:
thc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TCCBUS3UF1_17030
DNA repair and recombination proteins [BR:
thc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TCCBUS3UF1_17030
MMR (mismatch excision repair)
Other MMR factors
TCCBUS3UF1_17030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
FeoB_Cyto
DUF3553
Tudor_1_RapA
ResIII
FGF
Motif
Other DBs
NCBI-ProteinID:
AEV16744
LinkDB
All DBs
Position
complement(1698490..1700604)
Genome browser
AA seq
704 aa
AA seq
DB search
MDAFPSGKPLDEAWLSSLNEAQRQAVLHFEGPALVVAGAGSGKTRTVVHRVAYLMARRGV
YPSEILAVTFTNKAAEEMRERLKAMVKGAGELWVSTFHAAALRILRFYGERVGLKPGFVV
YDEDDQTALLKEVLKELGVSAKPGPIKALLDRAKNRGEPPERLLADLPEYYAGLSRGRLL
DVLHRYQQALWAQGALDFGDILLLALKLLEEDPEVRKRVRKRARFIHVDEYQDTSPVQYR
LTKLLAGEEANLMAVGDPDQGIYSFRAADIKNILQFTEDFPGAKVYRLEENYRSTERILR
FANAVIVKNALRLEKTLRPVKSGGEPVRLFRARDAREEARFVAEEVLRLGPPYDRVAVLY
RTNAQSRLLEQALASRGIGARVVGGVGFFERAEVKDLLAYARLALNPLDAVSLKRVLNTP
PRGIGPATVEKVQAIAQEKGLPLYEALKVAAQVLPRPEPLRHFLALMEELMDLAFGPAEA
FFRHLLEATDYPAYLKEAYPEDLEDRLENVEELLRAAREAEGLMDFLDKVALTARAEEPG
EAGGKVALMTLHNAKGLEFPVVFLVGVEEGLLPHRSSVSTLEGLEEERRLFYVGVTRAQE
RLYLSYAEEREVYGRPEASRPSRFLEEVEEGLYEEYDPYRLPPPKPVPPPHRAKPGAFRG
GEKVVHPRFGLGTVVAASGDEVTVHFDGVGLKRLSLKYADLRPA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
gtggatgctttcccgtcggggaaacccctggacgaggcttggctttcctccctgaacgag
gcccagcgccaggcggtcttgcactttgagggccctgccctggtggtggcgggggcgggc
agcggcaagacccgcacggtggtccaccgggtggcctacctgatggcccggcgaggggtg
tacccctcggagatcctggcggtgaccttcaccaacaaggccgccgaggagatgcgggag
cgcctcaaggccatggtcaagggggcgggggagctttgggtttccaccttccacgccgca
gccttgcgcatcctcaggttctatggggagcgggtgggcttgaagccgggctttgtggtt
tacgacgaggacgaccagacggccctcctgaaggaggtgctgaaggaactgggggtatcg
gccaagccggggcccatcaaggccctgttggaccgggccaagaaccgcggagagccgccg
gaaaggcttttggccgaccttcctgagtactatgctgggctttcccggggccggcttttg
gacgtgctccaccgctaccagcaggccctctgggcccagggggccctggactttggcgat
atcctcctcctggccctaaagcttctggaggaggacccggaggtgcgcaagcgggtgcgg
aagcgggcccgcttcatccacgtggacgagtaccaggacacaagccccgtccagtatcgc
ctcaccaagctgttggcgggggaggaggccaacctgatggccgtgggggacccggaccag
ggcatctactccttccgggccgccgacatcaaaaacatcctgcagtttacggaggacttt
cccggggccaaggtctaccgcctcgaggagaactaccgctccacggagcgcatcctgcgc
ttcgccaacgccgttatcgtgaagaacgccctgcgcctggagaagaccctgcgtccagtg
aagtctggcggggagcccgtgcgcctcttccgcgcccgggatgcccgggaggaggcccgc
ttcgtggccgaggaggtgctgcgcctgggccccccttacgaccgggtggcggtcctctac
cgcaccaacgcccaaagccgcctcctggagcaggccctggccagccggggcatcggggcg
cgggtggtgggaggggtgggcttctttgaacgggcggaggtcaaggaccttctggcctac
gcccgcctggccctgaaccctttggatgcggtgagcctgaaacgcgttttgaacacccct
ccccggggtatcggcccagccaccgtggaaaaggtgcaggctattgcccaggagaagggc
cttcccctctacgaggccttgaaggtggcggcccaggtcctaccccgccccgagcccctg
cgccacttcctggccctgatggaggagctcatggacctcgccttcggcccagccgaggcc
ttctttcgccatctcctggaggccacggactaccccgcttacctcaaggaagcctacccc
gaggacctcgaggaccgcctggaaaacgtggaggagctcctccgggcggcccgggaggcc
gaggggctcatggacttcctggacaaggtggccctcaccgcccgggccgaggagccgggg
gaggccggggggaaggtggccctcatgaccctgcacaacgccaaggggctggagttcccc
gtggtcttcctggtgggggtggaggaggggcttctgccccatcgctcctcggtgagcacc
ctggagggcctggaggaggagcgccgcctcttctatgtgggggtaacccgggcccaggaa
cggctttacctttcctatgccgaggagcgggaggtctacgggcggcccgaagccagccgt
cccagccgcttcctggaggaggtggaagaggggctgtacgaggagtatgacccctaccgc
cttccccctcccaagcccgttccccctccccaccgggccaagcctggggccttccgcggt
ggggaaaaggtggtccatccccgctttggcctgggcacggtggtggcggccagcggggac
gaggtaacggtgcactttgacggggtggggttaaaacgcctctccctcaagtacgccgac
ctgcgcccggcttag
DBGET
integrated database retrieval system
