Thermus sp. CCB_US3_UF1: TCCBUS3UF1_18150
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Entry
TCCBUS3UF1_18150 CDS
T01866
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
thc
Thermus sp. CCB_US3_UF1
Brite
KEGG Orthology (KO) [BR:
thc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thc03032
]
TCCBUS3UF1_18150
03036 Chromosome and associated proteins [BR:
thc03036
]
TCCBUS3UF1_18150
03400 DNA repair and recombination proteins [BR:
thc03400
]
TCCBUS3UF1_18150
DNA replication proteins [BR:
thc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
TCCBUS3UF1_18150
Chromosome and associated proteins [BR:
thc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
TCCBUS3UF1_18150
DNA repair and recombination proteins [BR:
thc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
TCCBUS3UF1_18150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AEV16855
LinkDB
All DBs
Position
1822535..1822783
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AA seq
82 aa
AA seq
DB search
MAAATNLKKKDVKAVVDAFLGKVEEALAGGNKVQLTGFGTFEVRKRKARTGVKPGTKEKI
KIPATQYPAFKPGKALKEQVKK
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
gtggcggcggccaccaacctcaagaagaaggacgtcaaggcggtggtggacgccttcctg
ggcaaggtggaggaggccctggccgggggcaacaaggtccagctcaccggcttcggcacc
tttgaggtgcgcaagcgcaaggcccgcaccggcgtgaagcccggcaccaaggagaagatc
aagatccccgccacccagtaccccgccttcaagccgggcaaggccctcaaggagcaggtc
aagaagtag
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