Thermus sp. CCB_US3_UF1: TCCBUS3UF1_3260
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Entry
TCCBUS3UF1_3260 CDS
T01866
Name
(GenBank) RNA binding S1 domain protein
KO
K02945
small subunit ribosomal protein S1
Organism
thc
Thermus sp. CCB_US3_UF1
Pathway
thc03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
thc00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
TCCBUS3UF1_3260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
thc03011
]
TCCBUS3UF1_3260
Ribosome [BR:
thc03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
TCCBUS3UF1_3260
Bacteria
TCCBUS3UF1_3260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
S1_2
Spt6_S1
RNase_II_C_S1
BPL_C
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AEV15374
LinkDB
All DBs
Position
348686..350371
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AA seq
561 aa
AA seq
DB search
MRVLPLLFVWTRAKSARLPQGEARKEERGGMEEKATQTPEKTFSMEEALQETEARLEKRV
RPGQVLTGKVVLVGSEGVAVDIGAKTEGIIPFNQLTEKVLPEEELKGLLKPGDEVRVQVL
RVDPETGQILLSRKKVEATEHWDHIQALYERGEPVTVTVKEKVKGGVVAELDGVQAFIPA
SQLDLRRTPNLDEYVGQQILAKIIEFHRKKGRVLLSRRAVLEEEQKRAKEAFFQSLKPGQ
VVEGAVVDVTDFGAFVNLGPVDGLVHRSEITWGRFGHPKEVIHKGQRVRAQVVSVDPAKE
RVNLSIKALIPDPWTTVAEKYPVGTRVKGKVVGLTPFGAFVEVEPGLEGLIHISELSWTK
RPKHPSEVVKEGDEVEAVVLRLDPGERRLSLGLKQTQPDPWQLLVEKYPPGTVVKGRVTG
VTDFGVFVELEPGMEGLVHVSELDHQRVDNPAAHFKKGEEMEVVVLNIDPVEQRISLSRK
RLLPPPPPKAEEERPRRAKGKEARSKRKPTPRREERREYEYGAVAEYNLYDASAVPTAST
SVKLGDLYGDLLASLGLEEEK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
gtgagggttctccccctccttttcgtgtggacgcgcgcgaaaagcgcccgccttccccaa
ggggaggcgcgtaaggaggaaagaggcggcatggaagaaaaggcgacccagaccccagaa
aagaccttcagcatggaagaggcccttcaggagaccgaggcccgcctggagaagcgcgtg
cgcccggggcaggtcctgacgggcaaagtggtcttggtgggttccgaaggcgtggcggtg
gacatcggcgccaagacggaaggcatcatccccttcaaccagctcacggagaaggtcctc
cccgaggaggagctcaaggggctcctcaagccgggggacgaggtgcgggtccaggtgctc
cgggtagacccggaaaccgggcagatcctcctctcccgcaaaaaggtggaggccaccgag
cactgggaccacatccaagccctctacgagcggggcgagccggtcaccgtcaccgtgaag
gagaaggtcaaagggggcgtggtcgccgagttggatggcgtccaggccttcatccccgcc
tcgcagctggacctgaggcgcacccctaacctggacgagtacgtgggccagcagatcctg
gccaagatcattgagttccaccgcaagaaggggcgggtcctcctctcccgccgggcggtg
ctggaggaggagcaaaagcgggccaaggaggccttcttccagagcctaaagcccggccag
gtggtggagggcgccgtggtggacgtcaccgacttcggggccttcgtgaacctgggtccg
gtggacggcctggtgcaccgctccgagatcacctggggccgtttcggccaccccaaggag
gtcatccacaaggggcagagggtgcgggcccaggtggtgtccgtggaccccgccaaggag
cgggtcaacctctccatcaaggccctgatccccgacccctggaccacggtggcggagaag
taccccgtgggcacccgggtcaagggcaaggtggtgggcctcacccccttcggggctttc
gtggaggtggagcctgggctggaagggctcatccacatctccgagctttcttggaccaag
cggcccaagcacccctccgaggtggtgaaggagggggacgaggtggaggctgtggtcctg
cgcctggaccccggagagcgccgcctttccctgggccttaagcagacccagcccgatccc
tggcagctcctggtggagaagtaccctccgggcaccgtggtcaagggccgcgtgacgggg
gttacggacttcggggtcttcgtggagctggagcccggcatggagggcctggtccacgtg
tcggagctggaccaccagcgggtggataaccccgccgcccacttcaagaagggcgaggag
atggaggtggtggtcctcaacattgaccccgtggagcagcgcatctccctctcccgcaag
cgcctcctgcccccgcccccgcccaaggcggaggaggagcggccccgcagggccaagggc
aaggaagcccgcagcaagcgcaagcccaccccgcgccgcgaggagcgccgggagtacgag
tacggggccgtggccgagtacaacctctacgatgcctccgcggtgcccaccgccagcacc
agcgtgaagctgggtgacctctacggcgacctcctggccagcctgggcctggaagaggaa
aagtaa
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