Thermus sp. CCB_US3_UF1: TCCBUS3UF1_4320
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Entry
TCCBUS3UF1_4320 CDS
T01866
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
thc
Thermus sp. CCB_US3_UF1
Brite
KEGG Orthology (KO) [BR:
thc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thc03032
]
TCCBUS3UF1_4320
03400 DNA repair and recombination proteins [BR:
thc03400
]
TCCBUS3UF1_4320
Enzymes [BR:
thc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TCCBUS3UF1_4320
DNA replication proteins [BR:
thc03032
]
Prokaryotic type
DNA Topoisomerases
TCCBUS3UF1_4320
DNA repair and recombination proteins [BR:
thc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TCCBUS3UF1_4320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AEV15480
LinkDB
All DBs
Position
complement(449973..451853)
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AA seq
626 aa
AA seq
DB search
MLKGLEGVRHRPAMYIGGTGVEGYHHLFKEILDNAVDEALAGHATEIITTLNPDGSLTVE
DNGRGIPVDVMPEEGKPAVEVIYTTLHSGGKFESGAYKVSGGLHGVGASVVNALSEWTVV
EVFRQGQHYRIAFSRGEVTEPLRVVGPAPEGKTGTRVTFKPDPQIFGPLAFDPSKLRARL
KEVSYLVAGLRLVFRDLQHGREEVYLDKGGVASFAKALAEGEELLYEKPFLIRKQEGEVE
VEVGLIHTKGYTAEILTYANMIPTRDGGTHLTAFKGAYSRALNQYAKKAGLHKEKGPQPT
GDDLLEGLYAVVSVKLPQPQFEGQTKGKLLNPEAGSAVSQVVYEKLLEILEENPRIAKTL
YEKALRAAQAREAARKARELVRRQNPLESDDLPGKLADCQTENPEEAELFIVEGDSAGGS
AKQGRDRRFQAVLPLRGKILNVEKAGLSKALKNAEVRAMVAAIGAGIGGTGDEAHFDLEG
LRYHKIIIMTDADVDGSHIRTLLLTFFYRYMRPLIEGGYVYIAQPPLYRLQVGKRVEYLY
SDEALAARLKELEGKAYEVQRFKGLGEMNPEQLWETTMNPEKRVLKRVELQDALEASELF
EKLMGQEVAPRREFIEEHARYAQLDI
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaaggggctggagggggtccgccaccgcccggccatgtacatcgggggcacgggg
gtggaggggtaccaccacctcttcaaggaaatcctggataacgccgtggacgaggccctg
gcgggccacgccaccgagatcatcaccaccctaaaccccgatggctccctcaccgtggag
gacaatggccgcggcatccccgtggacgtaatgcccgaggaagggaaacccgcggtggag
gtcatctacaccaccctgcactccgggggcaagtttgaaagcggggcctacaaggtctcg
ggcggcctgcacggggtgggggccagcgtggtcaacgccctctccgagtggacggtggtg
gaggtcttccgccagggccagcactaccgcatcgccttcagccggggagaggtgacggag
cccctacgcgtggtggggccggcccctgagggcaagaccggcacccgggtcaccttcaag
cccgacccgcagatctttggccccctggcctttgaccccagcaaactccgggcccgcctg
aaggaagtgagctacctggtggcggggctgaggctggtcttcagggacctgcagcacggg
cgggaggaggtctacctggacaaggggggcgtggcctcctttgccaaggccttggcggaa
ggggaggaactcctctacgagaagcccttccttatccggaagcaggaaggggaggtggag
gtggaggtgggcctcatccacaccaaggggtacaccgcggagatcctcacctacgccaac
atgatccccacccgggacgggggcacccacctcaccgccttcaagggcgcctacagccgg
gccctgaaccagtacgccaagaaggcgggcctccacaaggaaaaaggcccccagcccacg
ggggatgacctcctggaagggctttacgcggtggtgagcgtgaagctcccccagccccag
tttgagggccagaccaagggcaagctcctcaaccccgaggcggggagcgccgtgagccaa
gtggtctacgaaaagctcctggagatcctggaggaaaacccccgcatcgccaagaccctt
tacgagaaggccctccgggcggcccaggcccgggaagcggcccggaaggcccgggagctg
gtgcggcggcaaaaccccctggagtcggacgaccttcccgggaagctggccgactgccag
acggaaaaccccgaggaggcggagcttttcatcgtggagggagactcggcgggggggagc
gccaagcagggccgggaccggcgcttccaggccgtcttgcccctcagggggaagatcctg
aacgtggagaaggccgggctttccaaggccttgaaaaacgccgaggtgcgggccatggtg
gcggccatcggggccgggatcgggggcacgggggatgaggcccactttgacctcgagggc
cttcgctaccacaaaatcatcatcatgaccgacgccgacgtggacggaagccacatccgc
accctgctcctcaccttcttctaccgctacatgcgccccctgatcgaaggggggtacgtc
tacatcgcccagccccccctctaccgcctgcaggtggggaaaagggtggaatacctctac
tccgacgaggccctggccgcccgcctcaaggagctggaggggaaggcgtacgaggtgcag
cgcttcaagggcctgggggagatgaaccccgagcagctttgggagaccaccatgaacccg
gagaaacgggtgttgaagcgggtggagctccaggacgccctggaggccagcgagctcttt
gagaagctcatgggccaggaggtggcccccaggcgggagttcattgaggagcacgcccgc
tacgcccagctggacatctga
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