Thermus sp. CCB_US3_UF1: TCCBUS3UF1_4510
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Entry
TCCBUS3UF1_4510 CDS
T01866
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
thc
Thermus sp. CCB_US3_UF1
Brite
KEGG Orthology (KO) [BR:
thc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thc03016
]
TCCBUS3UF1_4510
Enzymes [BR:
thc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TCCBUS3UF1_4510
Transfer RNA biogenesis [BR:
thc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TCCBUS3UF1_4510
Prokaryotic type
TCCBUS3UF1_4510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AEV15499
LinkDB
All DBs
Position
469601..470539
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AA seq
312 aa
AA seq
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MALYAVDKPLHLTSHDAVEEARRRLGTRRVGHTGTLDPLATGLLLLVSEESTKLVPFLSG
EEKEYLAWVSFGATTPTLDAEGPVSEEAPVRFDRRDLESVLPSFLGLKEQVPPLYSAIKV
GGKRAYEAAREGRPLELGPRPVRYVEVELLALDPEPIPHPIAPSARGWRLAEKGGRRVEL
PRPLGAYPTAVIRLVVGPGTYVRAFARDLGEKLKTKAFLSGLVRTRIGKVGLERSVRLAE
LSPEKAIPEPDVLPFPVVELSHTEARRVLEGIPLPIPALGYVTLVDSRRRLLAIAEGDGF
KLKIRRVFVKEA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggccctctacgcggtggataagcccctccacctcacctcccacgatgcggtggaggag
gccaggcgtcgcctggggacgcgacgggtggggcatacgggcaccctggaccccttggcc
acggggctcctcctcctggtctccgaggagagcaccaagctggtgcccttcctctccggg
gaggagaaggaatacctggcctgggtttccttcggcgccaccacccccaccctggacgcc
gagggtccggtgagcgaggaggctccggtgcgttttgaccggagggatttggaaagcgtt
ttaccttccttcttggggctcaaggagcaggtaccccccctctactcggccatcaaggtg
gggggcaagcgggcctacgaggcggcccgggagggtaggcccttggagcttggccccagg
ccggtgcgctacgtggaggtggaactcctggccctggatcccgaacccatcccccacccc
atcgccccttcggcccggggttggcggctggcggaaaagggggggcgaagggtggagctt
ccccggcccctgggggcttaccccacggcggtgatccgcctggtggtggggccgggcacc
tacgtgcgggcctttgcccgcgacctgggggaaaagctcaagaccaaggccttcctctcg
gggctggtacgcacccgcatcggcaaggtgggcctggagcggtcggtgcgccttgccgag
ctttccccggagaaggccatccccgagcccgatgtcctgccctttcctgtggtggaactc
tcccataccgaggccaggcgcgtcctggagggcattcccctgcccatccccgccctgggc
tacgtgaccctggtagactcccgcaggcggcttttggccatcgcggagggcgatggcttc
aagctgaagatccgtcgggttttcgtaaaggaggcgtga
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