Thermus sp. CCB_US3_UF1: TCCBUS3UF1_5880
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Entry
TCCBUS3UF1_5880 CDS
T01866
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
thc
Thermus sp. CCB_US3_UF1
Pathway
thc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
thc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TCCBUS3UF1_5880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thc02000
]
TCCBUS3UF1_5880
Transporters [BR:
thc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
TCCBUS3UF1_5880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
AAA_29
SMC_N
AAA_16
TOBE_2
nSTAND1
nSTAND_NTPase5
SbcC_Walker_B
RsgA_GTPase
Mg_chelatase
ORC-CDC6-like
NACHT
NB-ARC
AAA_5
Rad17
AAA_30
AAA_14
Zeta_toxin
AAA_23
nSTAND3
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
AEV15636
LinkDB
All DBs
Position
complement(581622..582572)
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AA seq
316 aa
AA seq
DB search
MLALSLEKSFPGFRLAVALEVQEGEVLALLGPSGSGKSTLLRLITGLLPPDRGFVRFRDQ
DLTPLPPERRGVGFLFQDYALFPHLTVAENLAFGLVEARWPKAAREARVEELLRRMELTP
HARKRPQELSGGEQQRVALARALAPRPRLLLLDEPLGALDLRLREELLLFLRRTLRAEGI
TTLVVTHDQEEAFLLAGRVAVMREGRLVQVGRPEEVYTRPQDAWTARFLGHKNLLSPEES
QALGLPPKPHLLPPQALGLGGPLRGKVEERLFFGARVGLWVRAKGVRLYLEAPAGPEEGT
EVGLHLDPKRAVALGG
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
gtgctggccctttccctggagaagtcctttcccggcttccgcctggcggtggccctcgag
gtccaagagggggaggtcctggccctcctcggcccctcgggcagcggcaagagcacgctc
cttaggctcatcaccggcctccttccccccgacaggggcttcgtgcgcttccgggaccag
gacctcacccccctacccccggaacgccggggggtgggcttcctcttccaggactacgcc
ctcttcccccacctcacggtggcggagaacctggcctttggcctggtggaggcccgctgg
cccaaggcggcacgggaagcccgggtggaggaactcctcaggcggatggagctcaccccc
cacgcccggaaacgcccccaggagctttctggaggggagcaacagcgggtggccctggcc
cgggccctggccccaaggcccaggctcctcctcctggacgagcccctgggggctttagac
ctacgcctgcgggaggaactcctcctcttcctccgccgcaccctgcgggcggaagggatc
accaccctggtggtcacccacgaccaggaggaggccttcctcctggcggggcgggtggcg
gtgatgcgggagggccggctggtccaggtgggccggcccgaggaggtctacacccggccc
caggatgcctggaccgcccgcttcctggggcacaagaacctcctttccccggaggaaagc
caggccctgggcctaccccccaagccccacctcctacccccccaggccctgggcctggga
gggcccctcagggggaaggtggaggagcggctcttcttcggggcccgggtggggctttgg
gtccgggccaagggggtgcggctttacctggaagccccagcaggaccggaggaggggacg
gaggtggggctccacctggaccccaagcgggcggtagccttggggggatga
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