Thermus sp. CCB_US3_UF1: TCCBUS3UF1_6800
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Entry
TCCBUS3UF1_6800 CDS
T01866
Name
(GenBank) DNA mismatch repair protein mutS
KO
K03555
DNA mismatch repair protein MutS
Organism
thc
Thermus sp. CCB_US3_UF1
Pathway
thc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TCCBUS3UF1_6800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thc03400
]
TCCBUS3UF1_6800
DNA repair and recombination proteins [BR:
thc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
TCCBUS3UF1_6800
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
AAA_27
nSTAND_NTPase5
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AEV15728
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Position
666311..668737
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AA seq
808 aa
AA seq
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MLKGEGPGPLPPLLQQYVELRDRYPDYLLLFQVGDFYECFGEDAERLARALGLALTHKSS
KDFTTPMAGIPIRAFDAYAERLLKLGFRLAVADQVEPAEEAEGLVRREVTQLLTPGTLVQ
ESLLPKEANYLAALATGDGWGVAFLDVSTGEFKGTVLHGKSALYDELFRHRPAEVLLAPE
LRENPEFVEEFQKRFPVMLSEAPFDPVGEGPLALRRAQGALLAYARATQGGTLSVRPFRF
YDPGAFMRLPEATLRALEVFEPLRGQDTLFGVLDETRTAPGRRLLQGWLRHPLLDPGPLE
ARLSRVERFVREGALREGVRRLLFRLADLERLATRLELGRAGPRDLAALRRSLALLPELK
ALLGEEVGLPDLSALLGELQAALVEDPPLKLSEGGLIREGYDPHLDLLRRAHREGVAYFL
ELEEGEKARTGIPTLKVGYNAVFGYYLEVTRPYYDRVPPEYKPIQTLKDRQRYTLPELKE
RERELYRLEAQIRRREEEVFLEVRERAKGEVEALREAARVLAELDVYAALAEVAVRYGYT
RPRFGGRLRIVAGRHPVVERRTAFVPNDLEMAGELVLVTGPNMAGKSTFLRQTALIALLA
QVGSFVPAEEAELPLFDRILTRIGASDDLAGGRSTFMVEMEEVALILKEATERSLVLLDE
VGRGTSSLDGVAIATAVAEALHERRCYALFATHYFELTALPLPRLKNLHVAAKEEEGGLT
FYHQVLPGPASKSYGVEVARLAGLPPAVVERAQALLQAMAARREGLAAEVLERLLALDPD
RLTPLEALRLLHELRALALGTPLGTMKG
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagggcgaaggccctggtcccttacccccccttttgcagcagtacgtggagctg
cgggaccgctacccggactacctcctccttttccaggtgggggatttctacgagtgcttc
ggcgaggatgccgagcgcctggcccgcgccctgggcctggccctcacccacaagtccagc
aaggacttcaccacccccatggcggggatacccatccgggcctttgacgcctacgccgag
cgcctcctcaagctgggcttccgcctggcggtggccgaccaggtggagccggcggaggag
gccgaaggcctggtgcgccgcgaggtcacccagctcctcacccccgggaccctggtccag
gagagcctcctgcccaaggaggccaactacctggcggccctggccacgggggacggctgg
ggggtggcctttttggacgtgtccaccggggagttcaaggggacggtgttgcacggcaaa
agcgccctttacgacgagcttttccgccaccggcccgcggaggtcctcctggcccccgag
ctccgggaaaacccagagtttgtggaggagtttcagaagcgcttcccggtcatgctttcc
gaggccccctttgaccccgtgggggaaggccccctagccctgcggcgggcccagggggcc
cttttggcctatgcccgggccacccaggggggcaccctaagcgtccggcccttccgtttc
tatgaccccggggccttcatgcgcctgcccgaggccacccttagggccctggaggttttt
gagcccctacggggccaggacaccctgtttggggttctggacgagacccggaccgccccc
gggcgcaggctcctccagggctggctccgccatcccctcctggacccgggccccctggag
gcccggctttcccgggtggagcggttcgtgagggagggggccttgcgggagggggtccgg
cgcctcctctttcgcttggccgatctggagcggctcgccacccgcctggagctgggccgg
gcggggccccgggaccttgcggccctgcggcggagcctggccctccttcccgagctgaag
gccctcctgggggaagaggtgggccttcccgacctttccgcccttttgggggaactgcag
gcggccttggtggaggaccctcccctgaagctttccgagggggggctgatccgcgagggg
tacgacccccacctggaccttctgcggcgggcccaccgggagggggtggcctatttcctg
gaactggaggagggggagaaggcccggaccggcatccccaccctgaaggtgggctacaac
gccgtcttcgggtactacctggaggtgacccggccctactatgaccgcgtgcccccggag
tacaagcccatccagaccctcaaggaccgccagcgctacaccctgccggagctgaaggaa
agggagcgggagctttaccgcctcgaggcccagatccgccgccgggaggaggaggttttc
ctggaggtgcgggaaagggccaagggggaggtggaggccttaagggaggcggcccgggtc
ctggccgagctggatgtctacgccgccttggccgaggtggcggtgcgctatggctacacc
cggccccgcttcggcgggcggctgcgcatcgtggccgggcggcacccggtggtggagcgg
cgcacggccttcgtgcccaacgacctggagatggcgggggagctggtcctggtcacgggg
cccaacatggcggggaagagcaccttcctgcgccagaccgccctcatcgccctcctggcc
caagtggggagcttcgtccccgcggaggaggccgagcttcccctttttgaccgcatcctc
acccgcatcggggcctccgacgacctggcgggagggcggagcaccttcatggtggagatg
gaggaggtggccctgatcctcaaggaggccacggaaaggagcctggtccttctggacgag
gtgggccggggcaccagcagcctggacggggtggccatcgccaccgccgtggccgaggcc
ctgcacgagcggcggtgctacgctctcttcgccacccactactttgagctcaccgccttg
cccttgccccggctgaaaaacctgcacgtggccgccaaggaggaggagggggggcttacc
ttctaccaccaggtcctgcccgggccggcctccaagagctacggggtggaggtggcccgc
ctggcgggcctgcccccggcggtggtggagcgggcccaggccctcctccaggccatggcc
gcccggcgggagggcctggcggcggaggttttggagcggctcctcgccctggaccccgac
cgcctcacccccctggaggccctccgcctcctccacgagctcagggccttggccctggga
acccccttgggtaccatgaaggggtga
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