Thermus sp. CCB_US3_UF1: TCCBUS3UF1_7240
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Entry
TCCBUS3UF1_7240 CDS
T01866
Name
(GenBank) Holliday junction ATP-dependent DNA helicase ruvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
thc
Thermus sp. CCB_US3_UF1
Pathway
thc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TCCBUS3UF1_7240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thc03400
]
TCCBUS3UF1_7240
Enzymes [BR:
thc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TCCBUS3UF1_7240
DNA repair and recombination proteins [BR:
thc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TCCBUS3UF1_7240
RecFOR pathway proteins
TCCBUS3UF1_7240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
Mg_chelatase
AAA_22
TIP49
Sigma54_activ_2
AAA_14
nSTAND3
Rad17
TsaE
Bac_DnaA
NTPase_1
AAA_3
ABC_tran
RNA_helicase
AAA_33
bpMoxR
AAA_24
DUF815
MCM
AAA_18
AAA_17
NB-ARC
NACHT
NPHP3_N
IstB_IS21
AAA_28
AAA_PrkA
AAA_25
Resolvase
DUF87
Motif
Other DBs
NCBI-ProteinID:
AEV15772
LinkDB
All DBs
Position
complement(710994..711971)
Genome browser
AA seq
325 aa
AA seq
DB search
MEALPDLALRPKTLDEYIGQEKLKRKLKVYLEAAKARGEPLEHLLLFGPPGLGKTTLAHV
IAHELGVNLRVTSGPAIEKPGDLAAILANSLEEGDVLFIDEIHRLSRQAEEHLYPAMEDF
KMDIVIGQGPAARTIRLELPRFTLVGATTRPGLITAPLRSRFGIVEHLEYYTLEELAEGV
RRDARLLGVGISEEAALEIARRSRGTMRIAKRLFRRVRDFAQVAGEEAISGERAKEALAA
LGLDELGLERRDREILEVLILRFGGGPVGLQTLATALSEDPGTLEEVHEPYLIQQGLLKR
TPRGRVATERAYRHLGLPLPLEPLL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtggaggccctccccgaccttgccctaaggcccaaaaccctggacgagtacatcggccag
gagaagctcaagcggaagctaaaggtctacctcgaggccgccaaggcccggggggagccc
ttggagcacctcctcctcttcgggccgccgggcctgggcaagaccaccctggcccacgtg
atcgcccacgagctgggggtgaacctgcgggtcacctccgggccggccattgagaagccg
ggggacctggccgccatcctggccaactccctggaggagggagacgtgcttttcattgac
gagatccaccgcctaagccgccaggcggaggaacacctctacccggccatggaggacttc
aagatggacatcgttatcggccaggggccggcggccaggaccatccgcctggaactcccc
cggtttaccctggtgggggccaccacccggcctggcctcatcaccgcccccttgcgcagc
cgcttcggcatcgtggagcacctggagtactacaccctggaggagctggccgagggggta
cggcgggatgcccggcttttgggggtggggatcagcgaggaggccgccctggagatcgcc
cggcgcagccgcggcaccatgcgcatcgccaagcggcttttccgaagggtgcgggacttc
gcccaggtggcgggagaagaggccatctcgggggaaagggccaaggaagccctggccgcc
ttgggcctggacgagctggggctggagcgccgggaccgggagatcctggaggtcctcatc
ctgcgctttggcggcggccccgtgggcctgcagaccctggccacggccctttccgaggac
cccggcaccctggaggaggtgcacgagccctacctcatccagcagggccttctcaagcgc
accccccggggccgggtggccacggaacgggcctaccgccacctgggcctgcccctgccc
ctggagcccctcctctaa
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