Thermus sp. CCB_US3_UF1: TCCBUS3UF1_8940
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Entry
TCCBUS3UF1_8940 CDS
T01866
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
thc
Thermus sp. CCB_US3_UF1
Brite
KEGG Orthology (KO) [BR:
thc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thc03400
]
TCCBUS3UF1_8940
DNA repair and recombination proteins [BR:
thc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TCCBUS3UF1_8940
Archaeal homologous recombinant proteins
TCCBUS3UF1_8940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
ABC_tran
AAA_21
T2SSE
DUF1664
ABC_ATPase
AAA_28
AAA_15
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEV15939
UniProt:
G8NBX7
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All DBs
Position
878857..881730
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AA seq
957 aa
AA seq
DB search
MRPLRLELEGFGPYREAQAVDFSDVELFAITGPTGSGKSTLLDAMAFALYGRVPRVGRSV
KELKHPAVPEARVRLVFQVGGRVFRVDRVRGRRSEDRLFEILPQGERLLPLERQAEFNER
MAQILGLSYEAFTRALLLPQGEFDRFLKGEARERHEILADLFGLALLERARERAAERRSA
LLEEKGHLEGELRPLEGATLEAKEALEGELQGLRKEIARLTREEGRLAEEAKGAQEALRL
LRERHALESWRARLQAEAPAMAALEARLARAAEAERALPLWRDLRAKEEALKGTQGERQG
VEARLADLMEARRALAFSPEALRAAREALLEAQELKALEALWRRVGTQAHPTPRLDPAAL
EGVLAEEDRLAREAEALRAWARAKARREEEEKALSRLQEELSALEREGKALRAEAERVEG
ALQAATAHRLKEEVAALRARKEELERERARLERALEELAREERRLGLWAYRDLLEPGKPC
PLCGGVVHALPPLGEPSRLALERRSLEEELQALLRRLGALEGELAEKEKALSALPEPLPG
DLEALQTTLEGLKERLQALREGYRELQGKAKAMQEGLARLREEEARLAPKGVEEPEAALQ
QAERALAALRAEKEALGAGLYRHLQERTGGQGVKAHLEALRARVKDLEGQEREDQRLSQA
IQEAEHRLAALKAKEAEQERALAEARARVEGLLPEREAEALYLPPGEKEALEAQLRTHRE
EWAEVEARLRALPPAPPLSLEEAEARVQQAQKVLEESRKALEDLKRREAVLEERLRGLER
DLDRRRELEGRLAQVAQEVALWEKLALDLQRHNFPTYLLGLRQQHLVARADELLHTLSGG
RYRLRARGSEYAVLDLWTDAERPVKTLSGGESFLASLALALALSEELSQGRLGALFLDEG
FGTLDPETLELVAGVLESLPTRGRLVGIVTHVEALAERLPARLRVRKHLSGSRVEWA
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
ttgcggcccttgcgcctggagcttgagggcttcggcccctaccgggaagcgcaggcggtg
gacttttccgatgtggagctcttcgccatcaccgggcccacggggagcgggaagagcacc
ctcctggacgccatggccttcgccctctatggccgcgtgccccgggtggggcggagcgtg
aaggagctcaagcaccccgcggtccccgaggcccgggtgcgcctggtcttccaggtgggg
ggacgggttttccgcgtggaccgggtccgggggaggcggagcgaggaccggctttttgag
atcctgccccaaggggagcgccttctgcccctggagcgccaggcggagttcaacgagcgg
atggcccagatcctgggcctttcctacgaggccttcacccgggccctcctcctgccccaa
ggggagtttgaccgcttcctcaagggggaagcccgggagcggcacgagatcctggcggac
ctctttgggcttgccctgttggagcgggcccgggaaagggccgccgaaaggcgctcggcc
cttctggaggagaaggggcacctggagggggagctccgccctctggagggggccaccctc
gaggccaaggaggccctggagggggagcttcagggcctgcggaaggagatcgcccggctt
acccgggaggaagggcgcctggcggaggaggccaaaggggcgcaggaggccctccgcctc
cttcgggagcggcacgccctggagtcctggcgggcccgcctccaggcggaggccccggcc
atggccgccctggaggcgcggcttgcccgggcggcggaggcggagcgggccctgcccctt
tggcgggacctccgcgccaaggaggaggccctcaaggggacgcaaggggagcggcaaggg
gtggaggcccggcttgccgacctgatggaggcccggcgggccctagccttttcccccgag
gccctaagggccgcccgggaggcccttctggaggcccaggagctaaaggccctggaggcc
ctctggcgccgggtgggcacgcaagcccaccctaccccccgcctggacccggcggccctg
gagggggtgctggcggaggaggaccgcctggcgcgggaggccgaggccctaagggcctgg
gcccgggccaaggcccggcgcgaggaggaggaaaaggccctttcccgcctccaggaagag
ctctcggccctggagagggaagggaaggcccttcgggccgaggcggaaagggtggaaggg
gccttgcaggcggccaccgcccaccgccttaaggaggaagtggccgccctaagggcgcgc
aaggaggagttggaaagggagcgggcccgcctggaaagggccttggaagagctggcccgg
gaggagcggcgccttggcctttgggcctaccgcgacctcctggagcccgggaagccctgc
cccctctgcgggggggtggtccacgccctgccccccctgggggagccctcccggcttgcc
ctggagcggcgttccctggaggaggagctccaggccctgctccggcggcttggggccctg
gagggggagctggcggagaaggagaaggccctttccgcccttcccgagccccttcccggg
gacctcgaggccctgcagacaaccctggaagggctcaaggaacggttgcaggccctgcgg
gaggggtatagggagctccaggggaaggccaaggccatgcaggaggggctggcgaggctt
cgggaggaggaagcccgcctggccccaaaaggggtggaggagccggaggcggccctccag
caggcggagcgggccctggccgccctgagggcggaaaaggaggccctgggggcggggctt
taccgccacctccaggagaggaccgggggccagggggtgaaggcccacctggaggccctc
cgggcccgggtgaaggacctggaggggcaggagagggaggaccagcggctttcccaggcc
atccaggaggccgagcaccgcctggcggccctaaaggccaaggaggccgagcaggagcgg
gccctggccgaggcccgggcccgggtggaagggcttcttcccgagagggaggcggaagcc
ctttaccttcccccaggggagaaggaggccctggaggcccagctgcgcacgcaccgggag
gagtgggcggaggtggaggcccgcctgcgcgcccttcccccggccccgcccctttccctg
gaggaggccgaggcaagggtccagcaggcccagaaggtcctggaggaaagccggaaggcc
ctggaggacctaaagcggcgggaagcggtcctggaggagcgcctaagggggctagagagg
gatctggaccgccgccgggagctggagggccgcctggcccaggtggcccaggaggtggct
ctgtgggagaagctggccctggacctccagcggcacaacttccccacctacctcctgggc
ctgcggcagcagcacctggtggcgcgggccgacgagctcctccacaccctttccggaggg
cggtaccggctgcgggcccgggggagtgagtacgcggtgctggacctctggacggacgcg
gagcgcccggtcaagaccctttccgggggggagagcttcctggccagcctggccctggcc
ctggccctttccgaggagctttcccaggggaggcttggggcccttttcctggacgagggc
tttggcaccctggacccggaaaccctggagctggtggccggggtgctggagagcctgccc
acccgggggcggttggtgggcatcgtcacccatgtggaggccctggcggagcggcttccc
gcccggcttcgggtgcgcaagcacctctcggggagccgggtggagtgggcctag
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