Candidatus Tokpelaia hoelldoblerii: BHV28_02500
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Entry
BHV28_02500 CDS
T04701
Symbol
dnaX
Name
(GenBank) DNA polymerase III gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
thd
Candidatus Tokpelaia hoelldoblerii
Pathway
thd03030
DNA replication
thd03430
Mismatch repair
thd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BHV28_02500 (dnaX)
03430 Mismatch repair
BHV28_02500 (dnaX)
03440 Homologous recombination
BHV28_02500 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thd03032
]
BHV28_02500 (dnaX)
03400 DNA repair and recombination proteins [BR:
thd03400
]
BHV28_02500 (dnaX)
Enzymes [BR:
thd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BHV28_02500 (dnaX)
DNA replication proteins [BR:
thd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BHV28_02500 (dnaX)
DNA repair and recombination proteins [BR:
thd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BHV28_02500 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_30
AAA_16
AAA_5
AAA_19
AAA_18
AAA_14
VapE-like_dom
DUF815
SRP54
TsaE
RCF1-5-like_lid
ABC_tran
AAA_24
AAA_assoc_2
CbiA
AAA_33
SKI
nSTAND3
RNA_helicase
AAA_28
PduV-EutP
Motif
Other DBs
NCBI-ProteinID:
AQS40972
UniProt:
A0A1U9JSY2
LinkDB
All DBs
Position
complement(244722..246512)
Genome browser
AA seq
596 aa
AA seq
DB search
METDTTDKTYRVLARKYRPKDFSDLIGQEPMVRTLTNAFEAGRIAQAWMLTGVRGVGKTT
TARILARALNYKTDTIDKPAIDLATPGEHCQAIMEGPHVDVGEMDAASHTGIDDIREIIE
QVRYRPVTARYKVYIIDEVHMLSTQAFNGLLKTLEEPPPHVKFIFATTEIRKVPITVLSR
CQRFDLRRVSAATLTQHLQKIAAAEHVSAEDEALAMIARAGEGSVRDALSIMDQAIAHGN
NTVSVAAVRDMLGLADKARIIGLFELIMRGDVAPALRELKAQYDGGADPAVMIAELAEFN
HLVTRLRFTPELGDDPSLAEEERKRGKDFAARLSVRALARSWQMLLKGMAEVENAPRPLQ
AAEMLLIRLAHAADLPTLDEALQAIAENRPLPAPAQMPAPARKPSAPVQAAPIEIAPVAA
PEPAPVPPAPVVIAEPLPVMTPAEAEKKNPRPENLKALIALADTQRDIQLKFLLKEYVRL
VKLEGNSLTFEPAEDAPRTLSQQLGKALLDLTGERWIIKTVDSGGGATVAEEEKSKREAL
LSDAENDADVIAIQEAFPGAKVVDVRLNIQDDAAPYEGGADFTPPDGDDNALTQDL
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggatacgacagacaaaacctatcgcgttcttgcccgcaaataccgcccgaaa
gatttttccgacctcattggccaggaacccatggtgcgcaccctgaccaacgcctttgag
gccgggcgtattgcacaggcatggatgttgaccggtgtgcgcggcgtgggcaaaaccacc
acagcgcgcattctggcgcgggcactgaactataaaaccgataccattgacaaaccggcc
attgaccttgccacacctggcgagcattgccaggcgattatggaaggcccccatgtcgac
gtgggcgagatggacgccgcctcccataccggcattgacgatatccgcgaaattatcgaa
caggtgcgttatcgtcctgttaccgcccgctacaaggtttatattattgacgaggtgcat
atgctttccacacaggctttcaacggcctgctgaaaacactggaagagccgccgccacac
gtcaaatttatcttcgccaccactgaaatccgcaaagtgccgatcactgtgctgtcgcgc
tgccagcgttttgatttgcggcgtgtttccgccgcgacactgacacagcatctgcaaaaa
atcgcggcggctgaacatgtcagcgccgaggatgaagcactggccatgattgcccgcgcc
ggtgaaggttcggtgcgcgatgcactgtccattatggatcaggccattgcgcacggcaac
aatacagtcagcgttgcagcagtgcgcgatatgctcggccttgccgacaaggcgcggatt
atcggcctgtttgaattgatcatgcggggcgatgtcgccccggcgctgcgtgagttgaaa
gcccagtatgatggcggcgccgacccggcagtgatgattgccgagcttgctgagttcaac
catctggttacacggctgcgctttacaccagagcttggtgacgacccgtcccttgccgaa
gaagagcgcaagcgtggcaaggactttgccgcccggctttccgtccgggctttggcgcgc
agctggcagatgctgctcaagggcatggcggaagtggaaaacgcgccgcgcccgttacag
gcggcggaaatgctgctgatccgcctggcgcatgccgctgatctgccaacactggatgaa
gcactgcaagccattgccgaaaacaggcccctgccggcccccgcacaaatgcccgcgcct
gcccggaaaccatccgcacccgtgcaggccgccccgatagagatagcgcctgttgccgcg
cccgaaccggcccccgtgccgcccgcgccggttgtcatcgcagaacctcttcccgttatg
acacctgcggaagcggaaaaaaaaaatccccggcctgaaaatttaaaggcactgattgct
cttgctgatacacagcgtgatattcagctgaaatttttgctgaaagaatatgtgcgcctt
gtcaagctggagggcaacagcctgacgtttgaaccggcggaagacgcgccacgcaccctg
tcgcaacagcttggcaaagccttgctggacctgacaggtgaacgctggatcataaaaacc
gttgattcaggcggcggcgctaccgtggcggaagaagaaaaatcaaagcgtgaagccctg
ctgtcggacgctgaaaatgacgcggatgtgatcgccattcaggaggctttcccgggagcg
aaagtcgttgatgtgcggcttaacattcaggatgatgcggccccctatgaggggggtgct
gatttcaccccgccagacggtgatgacaacgctttaacacaggacttatag
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