Candidatus Tokpelaia hoelldoblerii: BHV28_05330
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Entry
BHV28_05330 CDS
T04701
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
thd
Candidatus Tokpelaia hoelldoblerii
Pathway
thd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
thd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BHV28_05330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thd03400
]
BHV28_05330
Enzymes [BR:
thd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BHV28_05330
DNA repair and recombination proteins [BR:
thd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BHV28_05330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AQS41240
UniProt:
A0A1U9JTQ9
LinkDB
All DBs
Position
complement(555408..556190)
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AA seq
260 aa
AA seq
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MKIATWNIAGIKARLDTLLAWLEQEKPDIACLQEVKSVDEKFPREAIEALGYHVETHGQK
GFNGVALLSRRSPDEVACGLPGDDNSDEQARFIEGVYSTAKGIIRVASLYLPNGNPVDSD
KYPYKLSWMKRLHDFAQERLQLEEPFVLAGDYNVIASPQDARNPKQWEEDALFLPQTRAA
FRQVLNLGFTDAIRAVSNEADYTFWDFQGGAWAKNNGIRIDHLLLSPEAADRLVTAHVQK
EVRGWEKPSDHVPVWIELNC
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagccacatggaatatagccggcatcaaggcgcggcttgacacgctgctggca
tggcttgaacaggaaaagcccgatatcgcctgcctgcaggaggtcaagtcggttgatgaa
aaatttccccgtgaagccatcgaagcgcttggataccatgtggaaacccatggccagaag
gggtttaacggcgtggcgctgctttcgcgccgctcaccggatgaggtggcatgcggtctg
cccggggatgacaacagcgacgaacaggcgcgctttattgaaggggtctattccaccgcg
aagggaatcatccgtgtcgcctcactttacctgcccaacggcaacccggtagatagcgat
aaatacccctataaattgtcatggatgaaacgccttcatgattttgcccaggaacggctg
caactggaagagccatttgtcctggccggtgattataatgtcatcgccagcccgcaggat
gcccgcaatccaaagcaatgggaggaggacgcactgttcctgccgcagacaagggcggct
ttccggcaggttctcaaccttggcttcacagacgctatccgcgcagtcagcaatgaggcg
gactacaccttctgggattttcagggtggggcatgggcaaagaacaacggcatccgcatt
gatcatctgctgctttcgccggaggctgccgaccggctggtgaccgcccatgtgcaaaaa
gaagtgcgcggctgggaaaaaccgtccgaccatgtgcctgtctggatagaacttaactgc
tga
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