Candidatus Tokpelaia hoelldoblerii: BHV28_05940
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Entry
BHV28_05940 CDS
T04701
Symbol
cas4
Name
(GenBank) CRISPR-associated protein Cas4
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
thd
Candidatus Tokpelaia hoelldoblerii
Brite
KEGG Orthology (KO) [BR:
thd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
thd02048
]
BHV28_05940 (cas4)
Enzymes [BR:
thd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
BHV28_05940 (cas4)
Prokaryotic defense system [BR:
thd02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
BHV28_05940 (cas4)
Subtype I-B factors
BHV28_05940 (cas4)
Subtype I-C factors
BHV28_05940 (cas4)
Subtype I-D factors
BHV28_05940 (cas4)
Type II CRISPR-Cas system
Subtype II-B factors
BHV28_05940 (cas4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cas_Cas4
PDDEXK_1
DUF6431
Motif
Other DBs
NCBI-ProteinID:
AQS41299
UniProt:
A0A1U9JTV3
LinkDB
All DBs
Position
610649..611320
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AA seq
223 aa
AA seq
DB search
MVGAAGDITGAESEPITLSALQHAAFCLRQAALIHLEQLWEDNLFTAEGNVLHAVVDKGG
TRKIAGVRRVSAMPLFSNHFNLTGKADLVEFIKQADGSEVVLPIEYKRGKPKLHRADEVQ
LCAQALCLEEMLGQRVEEGVLFYWQIKRRQKVPIDSALRQLTEKIIADFTSVMTSGKTPP
PLDDKRRCRSCSLVALCKPDIVLRPVKNWRSRIVRQIVSEEPS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcgcggcaggagacataacaggggcggagagtgaacccattacgctttccgcc
ttgcagcatgctgctttctgtttgcgtcaggcggcgcttattcatctggaacagctgtgg
gaagataatcttttcacagctgaaggtaatgttcttcatgctgttgttgataaaggggga
acgcgcaagatcgccggtgtgcgccgcgtatcagctatgcctttgttctcaaatcatttc
aatcttaccggtaaggctgatcttgtcgaatttataaaacaggctgatggcagtgaagtt
gttttgccgattgagtataaacgcggcaagccaaagcttcaccgtgcggatgaagtgcag
ctttgcgcacaggctctttgccttgaagagatgctgggacagcgggtagaagaaggcgtg
ttgttctattggcaaataaaacgacggcagaaagtgcctatagattctgccttgcggcaa
ctgacagagaaaattattgcggattttacctctgtgatgacaagtggcaagacaccgcca
ccattagatgacaaacggcgttgccgctcctgttcattggttgcattgtgcaagccggat
attgttttgcgtcctgttaaaaactggcgaagccgtatagtgcggcaaattgtgtcagaa
gaaccgtcatga
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