Candidatus Tokpelaia hoelldoblerii: BHV28_09070
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Entry
BHV28_09070 CDS
T04701
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
thd
Candidatus Tokpelaia hoelldoblerii
Pathway
thd03410
Base excision repair
thd03430
Mismatch repair
thd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BHV28_09070 (recJ)
03430 Mismatch repair
BHV28_09070 (recJ)
03440 Homologous recombination
BHV28_09070 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thd03400
]
BHV28_09070 (recJ)
DNA repair and recombination proteins [BR:
thd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BHV28_09070 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BHV28_09070 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BHV28_09070 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF998
CDC45
Motif
Other DBs
NCBI-ProteinID:
AQS41603
UniProt:
A0A1U9JUS3
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Position
950944..952749
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AA seq
601 aa
AA seq
DB search
MSDIARTADTLYFLGIDKSATDKIWREKLDTPARNNALAISQKYDVPDLLARVLSARGVD
EAQAETFINPSLRNLMPDPMTFTDMHKAATRIAQAVMKGEAVAVFGDYDVDGACSAAIMA
RFLRSFQLDCRIYIPDRLAEGYGPNKAAMRQLVLDGAKLVITVDCGANSAEAVGAALAAG
GDVVVLDHHQMAEAATATDCPLVNPNRPDDLSGQGHLCAAGVVFMTLVAVCQVLRQQAWK
SIPDLLGYLDLVALATVCDVVPLVGLNRAFVVKGLQIARTMHNPGLAALVKVARIGEPLN
VFHLGFILGPRINAGGRIGNSALGAELLSCDESAQAEAVAIQLDALNRERQEMETIQLEE
AETQIIAALEDKSLPAAIVVASKDWHPGIVGLIASRLKERLNRPAVAIAIRVDGTATGSA
RSVAGVDIGRLVSMAVTEGLLTKGGGHSMAAGLTIAPQKIALFQQWLPEKVKQNREEPES
RETLLIDGALSASGMTEQLFHMLEKAGPYGAGHEAPLLALPAHKLVDVREVGRGHISATL
SDISGKRLKAIAFRAAGTPLGDFLFNNRMKSIHLVGNLSINYWNGSVTPQLRIVDAALTN
R
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatattgcgcgcacagctgatacattgtactttttaggaatagacaagtctgcg
acagataaaatctggcgagaaaaacttgacacgcctgcgcgcaataatgctttggccata
agccagaaatatgatgtgccggatctgcttgcccgggtcttgtccgcccgtggcgttgat
gaggcacaggctgaaacttttatcaatccaagtctgcgcaatctgatgccggatcccatg
acttttactgatatgcataaggcagcaacccggattgcccaggctgtgatgaaaggcgag
gctgtggctgtatttggtgattatgatgtggacggagcctgttcagcggctattatggcg
cgctttctgcgatcttttcagcttgactgccggatttatattcctgaccgtctggctgaa
ggctatggccccaacaaagcagccatgcgccagttggttcttgatggagcaaaacttgtt
atcactgtcgattgcggcgcaaacagcgctgaagcggttggggcagcactggccgccggt
ggtgatgttgtggtgctcgatcaccatcaaatggcagaggctgctacagccacagactgc
ccgttggtcaacccgaaccggccggatgacttgtcagggcaggggcatctatgtgctgcc
ggtgtcgtgtttatgacattggttgcggtttgtcaggtcctacgccaacaagcgtggaaa
agcattcctgatcttcttggctatcttgatcttgttgctttggcaactgtttgtgatgtc
gtgccgcttgtcggtcttaatcgcgcttttgttgtcaaagggttgcaaatcgcgcgcacc
atgcacaatcccggccttgccgcattggtaaaagtcgcccggattggcgaaccgctgaat
gtgtttcacctcgggtttattctggggccgcgtatcaatgcaggcggacgaatcggcaat
tcggcattgggagcagaacttttaagttgtgatgagagtgcgcaggcagaagccgttgcc
atccagcttgatgccttaaacagggaacgccaggagatggaaaccatccagcttgaagaa
gctgaaacacagattattgcagcattggaagataagagcttgccagcggccattgttgtc
gccagcaaagactggcacccgggtattgtcggactgattgcttcacgtttaaaagagcgt
ttgaaccggcctgccgtggcaattgccattcgcgtggatggaacagcaaccggctcggcc
cgttctgtcgccggcgttgatattggcaggcttgtcagtatggccgtcacggaaggttta
ctgacaaaaggaggcgggcacagtatggctgccggtttaacgattgccccgcagaagata
gcgcttttccagcaatggctgcctgaaaaggtaaaacagaacagggaagaaccggaaagc
cgcgagactttgctgattgatggcgcactgtctgcaagcggcatgacagagcagcttttt
catatgctggaaaaagccggcccttacggggcagggcatgaggcgccgttgctggctttg
cccgcacataaactggttgatgtgcgcgaagtcgggcgcgggcatatcagcgcaacgctg
agtgatataagcggcaagcgtttaaaagctattgctttccgtgccgctggaacaccattg
ggagattttctttttaacaaccggatgaagagcattcatcttgtcggcaatctatccatc
aattactggaatggcagcgtaacgccacaactgcggattgttgatgcggccttaaccaac
agataa
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