Candidatus Tokpelaia hoelldoblerii: BHV28_09820
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Entry
BHV28_09820 CDS
T04701
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
thd
Candidatus Tokpelaia hoelldoblerii
Pathway
thd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BHV28_09820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thd03019
]
BHV28_09820
Enzymes [BR:
thd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BHV28_09820
Messenger RNA biogenesis [BR:
thd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BHV28_09820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AQS41677
UniProt:
A0A1U9JUX4
LinkDB
All DBs
Position
complement(1039209..1040579)
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AA seq
456 aa
AA seq
DB search
MKANQLNTSSETSFQQLGLSELLVKNLAHAGMVAPKPIQEKAIPAMLAGHDLLAIAQTGS
GKTLAFALPVLAQIAAMGSKRKPKTARALILAPTRELAVQIETSIRAVASNMHLAIGLIL
GGVSRHTQIKRMAAGVDVLIATPGRLMDHIREKNVDLSQTQFFVLDEADRMLDMGFIRDV
RRIAELLAPKRQTALFSATMPKEIAQLAQSLLRDPVEVETAPQGTTAGDITEKMYPVTMR
DKKQVLAGLLALPEFRSVIVFTRTKYGADAVTRHLEKTGYPVAAIHGNKSQNARQRALNG
FRDGSVRVLVATDIAARGIDVPGISHVINFELPDEAESYVHRIGRTGRNGASGVAITLYD
AALERSRLRGVEKVTRKRLDLQALPELPDVPFVKKPVTHEGAKKSPAAPAKQKRNRNRRP
KKSFTHKHGGGRQADMRAQGKPAKKSRSERRKRPAA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagcaaatcaattgaatacatcctcagagacttccttccagcaactgggcttgtcc
gaattgctggtgaaaaaccttgcccatgcgggaatggttgcgccaaaaccgattcaggaa
aaggcaatccccgccatgctggccgggcatgacctgctcgccattgcccagacaggctcg
ggcaagacgctggcttttgccctgccggtgctggcgcagattgccgctatgggcagcaag
cgcaagccgaaaacggcacgggcgctgattcttgcccccacgcgcgagctggctgtgcag
attgaaacaagcatacgcgctgttgccagcaatatgcaccttgccatcgggctgattttg
ggcggggtttcgcgccatacccagattaaacgtatggctgccggtgttgatgtgctgatt
gccacaccgggccggttgatggaccatatccgcgaaaaaaatgtcgatctgtcgcagaca
cagttttttgtgctggatgaggcggaccgtatgctggatatgggctttatccgcgatgtg
cgccgtattgccgaattattggcgcccaaacgccagacagcgcttttttctgccactatg
ccgaaagaaattgcccagctggcgcaaagtttgctgcgtgatccggttgaggtggaaacc
gcgccgcaagggacaacggcgggggacatcactgaaaagatgtatccggtgacaatgcgt
gacaaaaagcaggtgctggcaggattgctggccttgccggagttccgctcggtgattgtc
tttacccgtaccaaatacggggcggatgccgtcacccgccatctggaaaaaactggctat
ccggttgccgccattcacggcaacaaaagccagaacgcccgccagcgggctttaaacggt
tttcgcgatggttctgtgcgggtgctggtggcgacagatattgctgcgcgcggtattgat
gtgcccggaatcagccatgtcatcaattttgaactgccggatgaagctgaaagctatgtg
caccgtatcgggcgcacagggcgcaatggcgcgagcggtgtggcgataacgctttatgat
gccgcgctggaaagatcccgtttgcgcggggtggaaaaagtaacccgcaagcggctggac
ttgcaggccctgccggaattgccggatgtgccgtttgtcaagaagcctgttacgcatgag
ggcgcgaaaaaatcgcctgctgccccggcaaaacagaagcgtaaccgcaacaggcggcct
aaaaaatcctttacgcacaaacacggcggtggtaggcaggctgatatgcgcgcgcaaggc
aagccggcaaaaaaatcaaggtcggaacggcggaaaagaccggctgcctga
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