Candidatus Tokpelaia hoelldoblerii: BHV28_14720
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Entry
BHV28_14720 CDS
T04701
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
thd
Candidatus Tokpelaia hoelldoblerii
Pathway
thd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BHV28_14720 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thd03019
]
BHV28_14720 (pnp)
03016 Transfer RNA biogenesis [BR:
thd03016
]
BHV28_14720 (pnp)
Enzymes [BR:
thd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BHV28_14720 (pnp)
Messenger RNA biogenesis [BR:
thd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BHV28_14720 (pnp)
Transfer RNA biogenesis [BR:
thd03016
]
Prokaryotic type
tRNA degradation factors
BHV28_14720 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
PCB_OB
KH_PNO1_2nd
KH_2
Motif
Other DBs
NCBI-ProteinID:
AQS42154
UniProt:
A0A1U9JWA0
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All DBs
Position
1576821..1579016
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AA seq
731 aa
AA seq
DB search
MFKTHKVEIEWAGRPLTLETGKVARQADGAVMATYGETVVLATVVSAQEPKPGQDFFPLT
VNYQEKTYAVGRIPGGYFKREGRPSENETLTSRLIDRPIRPLFPEGYKNDTQVIITVLQH
DLENNPDVLAMVAASAALTLSGVPFMGPIAGARVGYIRGDYVLNPHIDEMPESQLDLVVA
GTSDAVLMVESEAHELPEDVMLGAVMFGQRGFQPVIDAIIKLAEAAAKEPREFMPEDFSA
LEKAMLKIAEKDLRKAYQITDKQQRYAAVDAVKAKVKEKLLPEGVEEPEFSEEQVNTVFK
HLQAKIVRWNILDTGSRIDGRDLKTVRPIEAQVGILPRTHGSSLFTRGETQAVVVATLGT
GEDEQYIDTLTGLVKETFMLHYNFPPFSVGETGRLGSPGRREIGHGKLAWRAIHPMLPAK
EAFPYTIRAVSEITESNGSSSMATVCGTSLALMDAGVPLAHPVAGIAMGLIKEGERFAVL
SDILGDEDHLGDMDFKVAGTANGITSLQMDIKIDGITEEIMKVALEQAKGGRTHILGEMA
KALSSSRAELGEFAPRIETMTIPTEKIRDVIGSGGKVIREIVEQTGAKINIEDDGTIKIA
SSDAKTIEAAKRWIHSIVDEPEVGEIYQGTVVKTADFGAFVNFFGPRDGLVHISQLANER
VAKTTDVVKEGDRVWVKLLGFDERGKVRLSMKVVDQESGKEIAREAGDEDNDDAQGNERP
AKRRPRRNRED
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaacacataaagtcgaaattgaatgggcgggccgcccgttaacccttgaaacc
ggtaaagtcgcccgtcaggccgatggtgccgttatggccacctatggcgaaaccgtggtg
cttgccacagttgtttctgcgcaggagccgaaaccggggcaggattttttcccgctcact
gtcaattatcaggaaaaaacctatgccgtcgggcgtatcccggggggttacttcaagcgc
gaaggccgcccgagcgaaaacgaaacgctgacttcgcgtctgattgaccggccgatccgc
ccgctgttcccggaaggttataaaaacgatacgcaggtgattatcaccgttttgcagcat
gatctggaaaataaccccgatgttctggcaatggttgccgcttctgcagcgctgacactt
tcaggcgtgccgttcatggggccgattgccggtgcgcgcgttggttatatccgcggtgat
tatgtgcttaacccgcatattgatgaaatgccggaatcgcagcttgacctcgtggttgcc
ggtacatcggacgctgtgctgatggttgaatccgaagcccatgaactgccggaagatgtc
atgctcggcgcagtcatgttcggccagcgcggtttccagccggtgattgacgccattatt
aaactggcggaagcagcggcaaaagaaccgcgcgaattcatgccggaagatttttccgcc
cttgaaaaagccatgctgaaaattgctgaaaaagacctgcgcaaggcctatcagattacc
gacaagcagcagcgttatgccgctgtcgatgcggtaaaggcaaaggtgaaggaaaagctg
ctgccggaaggcgtggaagagccggaattcagcgaagaacaggtcaacacggttttcaag
catttgcaggcgaagattgtgcgctggaacattcttgacaccggcagccgtattgatggc
cgcgatctgaaaaccgtccgcccgattgaggcgcaggtcggcattctgccgcgcacccac
ggttcatccctgttcacccgtggtgaaacacaggctgtcgtggtcgcaacgctgggcacc
ggtgaagacgagcagtatattgatacgctgacaggtctcgtcaaagaaaccttcatgctg
cattacaacttcccgccgttctcggttggtgaaacagggcgtctcggctctcccggccgc
cgtgaaatcggccacggcaagttggcatggcgtgctatccacccgatgctgccggccaag
gaggctttcccctacacgatccgcgcggtttcggaaatcactgaatccaatggttcatct
tcaatggcaactgtctgcggcacttcgctggcattgatggatgccggtgtaccactggca
catccggttgccggtatcgctatgggcctcatcaaggaaggtgaacgttttgctgtcctt
tctgatattctgggtgatgaagaccatctcggcgatatggacttcaaggttgccggcaca
gcaaacggcatcacctcactgcagatggacatcaagattgacggtattaccgaagaaatc
atgaaggtagcgctggaacaggcaaaaggcggccgcacccatatcctcggtgaaatggca
aaagccctttccagttcgcgcgctgaactgggcgaatttgccccgcgcattgaaaccatg
accattccgaccgaaaaaatccgtgatgttatcggttccggcggcaaggtgatccgtgag
attgtcgagcagaccggggcgaaaatcaacattgaggatgatggcacgattaaaatcgct
tcgtctgacgccaaaaccattgaagcggcaaagcgctggatccattcgattgttgatgag
ccggaagtcggtgaaatctatcagggtacggttgtcaaaacagctgatttcggcgcgttc
gtcaacttcttcggcccgcgtgacggcctggtgcatatctcgcaactggccaatgagcgc
gttgccaaaaccacggatgtggtgaaggaaggtgatcgcgtctgggtgaagttgctgggc
tttgacgagcgcggcaaagtgcgcctgtcgatgaaggttgtcgatcaggaaagcggcaag
gaaattgcccgcgaagccggcgatgaagacaatgatgacgcacaaggcaatgagcggccc
gccaagcgccgcccgcgcagaaaccgtgaagactga
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