Candidatus Tokpelaia hoelldoblerii: BHV28_15490
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Entry
BHV28_15490 CDS
T04701
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
thd
Candidatus Tokpelaia hoelldoblerii
Brite
KEGG Orthology (KO) [BR:
thd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thd03016
]
BHV28_15490
Enzymes [BR:
thd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BHV28_15490
Transfer RNA biogenesis [BR:
thd03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BHV28_15490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AQS42229
UniProt:
A0A1U9JWI0
LinkDB
All DBs
Position
complement(1659345..1659965)
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AA seq
206 aa
AA seq
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MAEIRVHQGDLPDLSQYQVSSVAIDTETLGLNPHRDRLCVVQLSSGDGSADLVQIKRGQK
TAPNLVKLLGNRKITKIFHFGRFDLAVLYHAFGIMPQPVFCTKIASKLTRTYTDRHGLRE
ICSELLDVNISKQQQSSDWGAPELTTAQKEYAASDVLYLHRLKDMLETRLKRDGREAEAK
ACFEFLPARARLDLMGWPEQDIFAHT
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaatccgtgttcatcagggcgacttgcccgacttgtcacagtatcaggtttcc
tctgtcgctattgatacggaaacactggggcttaacccgcaccgtgaccggttgtgcgtg
gtgcagctttccagcggtgatggcagcgctgatctggtgcaaattaaacgtgggcagaaa
accgcgcccaatctggtgaaactgctcggcaacaggaaaatcaccaagattttccatttc
ggccggtttgatctggcggtgctctaccatgctttcggcattatgccgcaaccggtgttc
tgcaccaagattgcctcgaaattaacccgcacctatacggacaggcatggtttgcgtgaa
atctgcagcgaattgctggatgtcaatatttccaagcagcagcagtcttctgactggggc
gcgccggaactgacaacggcgcagaaggaatatgcggcctctgacgtgctttatctgcac
cggctgaaagacatgctggaaacgcgcctcaagcgtgacgggcgcgaggcagaagcaaaa
gcctgttttgagtttctgcccgcgcgcgcgcgtcttgacctgatgggctggccggaacag
gatattttcgcccatacataa
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