KEGG   Thermococcus sp. 4557: GQS_00560
Entry
GQS_00560         CDS       T01588                                 
Name
(GenBank) CRISPR-associated helicase Cas3 domain-containing protein
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
the  Thermococcus sp. 4557
Brite
KEGG Orthology (KO) [BR:the00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:the02048]
    GQS_00560
Enzymes [BR:the01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GQS_00560
Prokaryotic defense system [BR:the02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    GQS_00560
SSDB
Motif
Pfam: Cas3-like_C_2 Helicase_C DEAD Cas3_HD HD ResIII DUF4220
Other DBs
NCBI-ProteinID: AEK72015
UniProt: G0HK03
LinkDB
Position
complement(127333..129435)
AA seq 700 aa
MEWDNLIELMKRKRAKAKPDRSLYDHSKGAQEIARGLLPKIPHDERLDECLLLHVFLHDI
GKLDDRFQAKLDGKLGKAPPHAYLGLELASRFLNCQEPYRTIALASILSHHSDLHQALYS
NEIERGEKLVVDGTTISEPADFVWELRERILGGDLEDDYDMDPVEVRALYTLFNGLLRVS
DWLESGGFSAETYHLPGGGAVRDLTAGYLKNKGFSLRPYQRVALGRGGGYFRLPTGDGKT
ETSLLATPDGASRVVYSLPTITTTEAMRKRFESMFGKDTVSFSHSMLFLSLYRKGALDER
LIHRYAMRPIFVSTIDQVLLAFLNYPRFPVREFALRGAHWIIDEIHAYSPFTLSLILDAI
EYAIKYLKAHVTVMSATLPSHVIAELEGRGLQPLIPLKSVEERYRSRKRVDVKVRDEPLM
NAVDEIAGEGGKVLVVANTVTRARHLYEELRRKRKDVYLFHSRFINKDKENKMELVGKID
RGILVATQVVEVSLDIDYDVMYTETAPLDSLIQRFGRVNRRGQKKGRVYIFQPEGKRKHL
PYDRDAFKASLALLGELEGMESELHLLELNDRFYDEIWNNYEGKLEERPLLKTLRTINRW
KKSEDWLSTRDTFMTLPAIPRPFINTAAEFASRWDELSREKRLDAAVYVMEHTVNVPIWV
LGEARLYSEDIYERFGVFGVDVDYDSEVGIKEEKKKLMLF
NT seq 2103 nt   +upstreamnt  +downstreamnt
atggaatgggacaatttgatagaactcatgaagaggaagcgagccaaggccaaacctgac
aggagcctctacgaccactccaagggggcgcaagaaatagccagaggacttctgccaaaa
atcccccacgatgagcggctcgatgaatgcctgctccttcacgtcttccttcacgacatt
ggaaagctcgatgacagattccaggccaaactcgatggaaaactgggaaaggcacctccc
cacgcgtacctcggactcgagctggcctcgcggtttctgaactgccaagaaccctacagg
acgatagccctagcctcaatactaagccatcactctgaccttcaccaagcactttacagc
aacgagatagagcgcggggagaaactggtagttgacggaaccactatttcagagcccgct
gatttcgtctgggagctcagagaaagaattcttggaggggatctggaggacgactatgac
atggatcctgtagaggtccgcgccctgtacacgctcttcaacggtcttctccgcgtttca
gactggcttgaaagcgggggtttctcggcggagacgtatcacctgccggggggaggagcc
gtccgggacctgaccgcagggtatctgaagaataagggcttctcgctcaggccatatcaa
agggtggcgctgggcaggggaggcggatacttcagactcccgactggagacggcaaaacg
gaaaccagcctcctggcaacccctgatggagcctctagagtggtctattcactcccaacg
ataaccaccacggaggcaatgaggaaacgctttgaatccatgtttgggaaggatacggtc
tcgttttcccacagcatgctgttcctgagcctttaccggaaaggtgccctggacgagcgt
ctcattcaccgctacgcgatgaggcccatcttcgtatcaacaatcgaccaggttctgctg
gctttcctgaactatccacgcttcccggtcagggagttcgcactcagaggagcgcactgg
ataatcgacgagatacacgcctacagcccgttcacactatcccttatcttggacgcgatt
gaatacgctatcaaatacctaaaagcccatgttaccgtaatgtctgctacactgccatcg
cacgttattgcggaactggaggggagggggcttcagccgctaatccccttaaagagcgtt
gaggagcgctaccgttccaggaagagggtggatgtgaaggtgagggacgagccgctgatg
aacgccgttgatgagatcgctggcgagggcggtaaggttctggtggtcgccaataccgta
acgagggccagacacctctacgaggagctccggagaaaaagaaaggacgtgtacctcttc
cattcaaggttcatcaataaggacaaggaaaataaaatggaactcgtgggaaaaattgac
aggggaatactcgtggccacccaggtggtcgaggtttcccttgatatagactacgatgtg
atgtacaccgagaccgccccgctggactctctgatacagcgctttgggcgggtcaacagg
agggggcagaaaaaaggcagggtgtacatcttccagccagagggcaaaagaaagcatctg
ccatatgacagggatgcattcaaggcaagcctggcccttcttggagaactcgaaggcatg
gagagtgagcttcaccttctggagctcaacgacaggttttatgacgagatatggaataac
tatgagggcaagctcgaggagagaccgctcttaaaaactctaaggacaataaatcgttgg
aaaaagagcgaagactggctatccacgagggacaccttcatgaccctgccggcgattcca
cggccattcattaatacggccgcagaatttgcctcccgctgggatgaactgtccagggag
aaacggctggacgcggcggtttacgtgatggagcacacggtgaatgtacctatatgggtg
ctcggggaggcaaggctctacagcgaggacatctacgaaagattcggggtttttggcgtt
gacgtggactacgacagcgaagtggggataaaagaggagaaaaagaagctgatgctattt
taa

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