Thermococcus sp. 4557: GQS_01130
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Entry
GQS_01130 CDS
T01588
Name
(GenBank) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
the
Thermococcus sp. 4557
Pathway
the03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
the00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GQS_01130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
the03019
]
GQS_01130
03016 Transfer RNA biogenesis [BR:
the03016
]
GQS_01130
03012 Translation factors [BR:
the03012
]
GQS_01130
04131 Membrane trafficking [BR:
the04131
]
GQS_01130
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
the04147
]
GQS_01130
Messenger RNA biogenesis [BR:
the03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
GQS_01130
Transfer RNA biogenesis [BR:
the03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
GQS_01130
Translation factors [BR:
the03012
]
Eukaryotic type
Elongation factors
GQS_01130
Membrane trafficking [BR:
the04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
GQS_01130
Exosome [BR:
the04147
]
Exosomal proteins
Proteins found in most exosomes
GQS_01130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
RsgA_GTPase
Gtr1_RagA
FeoB_N
GTP_EFTU_D4
EF-G_D2
Motif
Other DBs
NCBI-ProteinID:
AEK72129
UniProt:
G0HKS9
LinkDB
All DBs
Position
233799..235085
Genome browser
AA seq
428 aa
AA seq
DB search
MAKEKPHINIVFIGHVDHGKSTTVGRLLFDSQNIPENIIQKFEQMGEKGKSFKFAWVMDR
LKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAVTDGV
MPQTKEHAFLAKTLGINHVIVSINKMDMVNYDEKKFKQVAEQVKKLLMMLGYKNVQVIPT
SAWEGDNIVKKSDKMPWYNGPTLFEALDQIPEPPKPTDKPLRIPIQDVYSIKGVGTVPVG
RVETGVLKVGDVVIFEPASTIFHKAIQGEVKSIEMHHESMQEALPGDNIGFNVRGVGKND
IKRGDVAGHTNNPPTVVRPKDTFKAQIIVLNHPTAITVGYTPVLHAHTLQVAVRFEQLLA
KLDPRTGNIVEENPQFIKTGDSAIVILRPTKPMVIEPVKEIPQMGRFAIRDMGQTVAAGM
VISVQKAE
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggagaagccgcacattaacattgtctttatcggacacgtcgaccacggaaag
agcaccaccgttggaaggctcctgttcgacagccagaacatcccggagaacatcatccag
aagttcgagcagatgggtgagaagggtaagtccttcaagttcgcttgggtcatggacagg
ctcaaggaggagcgcgagaggggtatcaccatcgacgtcgcccacaccaagttcgagacc
ccgcacaggtacatcaccatcatcgacgctccgggtcacagggacttcgttaagaacatg
atcaccggtgccagccaggctgacgccgccgttctcgtcgtcgccgtcaccgacggtgtc
atgccgcagaccaaggagcacgccttcctcgccaagaccctcggtatcaaccacgtcatc
gtctccatcaacaagatggacatggtcaactacgacgagaagaagttcaagcaggtcgcc
gagcaggttaagaagctcctcatgatgctcggctacaagaacgtccaggtcatcccgacc
agcgcttgggagggcgacaacatcgtcaagaagagcgacaagatgccctggtacaacggc
ccgaccctcttcgaggccctcgaccagataccggagccgccgaagccgaccgacaagccg
ctccgcatcccgatccaggacgtctactccattaagggtgtcggtaccgtcccggtcggc
cgtgtcgagaccggtgtcctcaaggtcggtgacgtcgtcatcttcgagccggccagcacc
atcttccacaaggccatccagggtgaggtcaagagcatcgagatgcaccacgagtccatg
caggaggcccttccgggtgacaacatcggtttcaacgtccgtggcgttggtaagaacgac
ataaagcgcggtgacgttgccggacacaccaacaacccgccgaccgtcgtcaggccgaag
gacaccttcaaggcccagatcatcgtcctcaaccacccgaccgccatcaccgtcggctac
accccggtcctccacgctcacaccctccaggtcgccgtcaggttcgagcagctcctcgcc
aagctcgacccgaggaccggtaacatcgtcgaggagaacccgcagttcatcaagaccggt
gactccgccatcgtcatcctcaggccgaccaagccgatggtcatcgagccggtcaaggag
atcccgcagatgggcaggttcgccatccgtgacatgggccagaccgtcgctgccggtatg
gtcatctccgttcagaaggccgagtga
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