Thermococcus sp. 4557: GQS_03950
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Entry
GQS_03950 CDS
T01588
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
the
Thermococcus sp. 4557
Pathway
the03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
the00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GQS_03950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
the03021
]
GQS_03950
Enzymes [BR:
the01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GQS_03950
Transcription machinery [BR:
the03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
GQS_03950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Zf_2nd_IFT121
DUF5817
Auto_anti-p27
Zn_ribbon_NOB1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
AEK72691
LinkDB
All DBs
Position
762053..765421
Genome browser
AA seq
1122 aa
AA seq
DB search
MASRGPTVVDVTPDDLWLVMDAYWKERGLVRQHLDSYNAFIESGMQRVIYEFGGLKPDIP
DFEVKFGKIRLGEPEFQEAQGQRKPLYPMDARIRNLTYSAPLYLELIPVIKGIEQEAVEV
RIGELPIMLKSKACRLYGLSDEELIKLGEDPKDPGGYFIINGSERVIVSIEDLAPNKTLV
ERDERQNRIIAKVFSYRHGYRALITVERRKDGILYVNIPNVPRPVKFVYVMRALGLLSDK
EIVEAVSDDPRIQQVLFDNLEDASDVMNQEDALDYIGKLSLPGQPKEYRLRRAEHIIDNN
LLPHMGVEPERRKAKAYYLGMMALKVLELSLGLRGEDDKDHYANKRLKLAGDLLRDLFRV
AFGQLVKDMQYQMTKTYQRKGERYTFENIQRFVRNSIRPDVLSERIEHALATGAWPGGRT
GVSQLLDRTNYMSTLSHLRRVTSPLSRDQPHFEARDLHGTHWGRICPTETPEGPNCGLVK
NLSLMSQITTGIPEEEVREYLNKLGVVSIEERRPSPELWRLYLNGVLIGTIEDGESLVRR
IRSDRRSGKISDVINVAMYQDEEVREVYVNSDDGRVRRPLIIVENGKPKLTKEHVDAIKN
GALTWNDLVKMGIIEYLDAEEEENAYVATWPWEVTEEHTHLELMPAAILGIPASLVPYPE
HNAAPRNTYGAGMAKQSLGFGAANFRIRVDTRGHLMHYPQVPLVNSRIMKAVGFEERPAG
QNFVVAVLSYGGYNMEDAIIMNKASIERGLGRSTFFRTYEAEEKRYLGGQTDRFEVPDPT
IQGYLGEKYYRHLDEDGIIFPESKVTGKDVLVGRTSPPRFLEEQSGLGGIILQERRETSV
TVRPSERGIVDKVIITETGDGTKLVKVTTRDLRIPEFGDKFASRHGQKGVVGLIVPQEDM
PWTESGIVPDLIVNPHGIPSRMTVGQLIEAIGGKVAALTGRRVDGTAFIGEPEEKLRKEL
EELGFKHSGREVMYDGITGRRLEADIFVGVIYYQRLHHMVADKMHARSRGPVQVLTKQPT
EGRAREGGLRFGEMERDVLIGHGAAMLLIERLLEESDKTEVWVCESCGHLALEDKRRGKV
YCPVCGEEEKISKVEMSYAFKLLLDELKAMGIRPSLKITDRV
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgagaggaccaaccgttgtggatgttactcctgacgacctctggctcgttatg
gacgcctactggaaggagagggggctcgtaaggcagcaccttgattcttacaacgctttc
attgagagcggcatgcagcgggtcatatacgagttcggcggcctgaagccggacatcccg
gacttcgaggttaagttcggtaaaatacgcctgggcgaacccgagttccaggaggcccag
gggcagaggaagccgctctacccgatggacgccaggataaggaacctgacctactcggcc
ccgctctacctcgagctcatccccgtcatcaagggcatcgagcaggaggccgttgaggtc
cgcattggagagctcccgataatgctcaagtccaaggcctgcaggctttacggcctcagc
gacgaggagctcatcaagctcggcgaggatccaaaggacccgggaggatacttcatcata
aacggttctgagagggttatagtctctatcgaggacctcgccccgaacaagaccctcgtt
gagcgcgacgagaggcagaacaggataatcgcaaaggtcttctcatacagacacggttac
agggccctgataaccgtcgagaggaggaaggacggtatcctctacgtcaacatcccgaac
gttccgagacccgtcaagttcgtttacgttatgcgcgccctcggtcttctgagcgataaa
gagatcgtcgaggccgtgagcgatgatccgaggatacagcaggttctcttcgacaacctc
gaggacgccagcgacgtgatgaaccaggaggacgctctcgactacataggaaagctctcc
ctgcccggccagccgaaggagtacaggctcaggagggccgagcacatcatagacaacaac
ctcctcccgcacatgggcgtcgagccggagaggaggaaggccaaggcctactacctcggc
atgatggccctcaaggttctcgagctttcgctcggcctccgcggtgaggacgacaaggac
cactacgccaacaagaggctcaagctcgctggagacctcctcagagacctcttccgcgtc
gccttcggccagctcgtcaaggacatgcagtaccagatgaccaagacctaccagaggaag
ggtgagcgctacaccttcgagaacatccagcgctttgtgagaaactccataagaccggac
gtcctcagcgagagaattgaacatgccctcgcgaccggtgcctggcccggcggaaggacc
ggtgtgagccagcttctcgatagaacgaactacatgagcaccctttcacacctcaggcgc
gttacctccccgctcagcagggaccagccccacttcgaggcgcgtgaccttcacggaacc
cactggggaagaatctgtccgacggagactccggaaggtccgaactgtggtctcgttaag
aacctctcactgatgtcccagataaccaccggcattcccgaggaggaggtcagggagtat
ctgaacaagctcggcgtcgtttccatcgaggagcgccgcccgagccccgagctctggcgt
ctctacctcaacggtgttctcatcggaaccatagaggacggagagtccctcgtccgcagg
ataaggagcgacaggagaagcggaaagataagcgacgtcatcaacgtggcgatgtaccag
gacgaggaggtcagggaagtatacgtcaacagcgacgacggccgcgtcaggagaccgctc
atcatcgtcgagaacggcaagcctaagctaaccaaggagcacgtcgatgcaataaagaac
ggagccctcacctggaacgacctggtgaagatgggcatcatagagtacctcgacgctgaa
gaggaggagaacgcctacgttgccacctggccctgggaggtcacggaggagcacacccac
ctcgagctcatgccggccgcgatactcggtatcccggcttcgctcgtcccgtacccggag
cacaacgcggccccgcgtaacacctatggggcgggtatggccaagcagagcctcggcttt
ggtgccgccaacttcaggataagggtggacacgcgcgggcacctcatgcactacccgcag
gttccgctcgtcaactcacgcatcatgaaggccgtcggtttcgaggagaggcccgccggt
cagaacttcgtggtcgcggttctcagctacggcggctacaacatggaggacgcaatcatc
atgaacaaggcctccatcgagcgcggtctcggaaggagcacgttcttcagaacctacgag
gccgaggagaagcgctacctcggcggtcagaccgaccgctttgaggttcccgacccgacc
atacagggctatctcggcgagaagtactaccgccacctcgacgaggacggtataatcttc
ccggagtcaaaggtcacgggtaaggacgttctcgtcggcagaacttcaccgccgaggttc
cttgaggagcagagcggtctcggaggaataatcctccaggagagaagggaaacgagcgtc
accgtcaggccgagcgagaggggtatagttgacaaggtcatcatcaccgagaccggcgac
ggaaccaagctcgtcaaggtgaccaccagggacctccgcatcccggagttcggagacaag
ttcgcatcgaggcacggtcagaagggtgtcgtgggcctcatcgttccgcaggaggacatg
ccctggaccgagagcggaatcgttcccgacctcatcgtcaacccgcacggtatcccgagc
cgtatgaccgtcggacagctcatcgaggccataggcggaaaggtcgccgccctcaccgga
aggagggtcgatggaaccgcgttcattggtgagcccgaggagaagctcaggaaggagctt
gaggagcttggattcaagcacagcggcagggaagtcatgtacgacggcataaccggaaga
agactggaggccgacatattcgtgggcgtcatctactaccagaggctccaccacatggtc
gccgacaagatgcacgcgaggagcagaggtccggtgcaggttctcaccaagcagccgacc
gagggaagggccagggaaggtggtctcaggttcggtgagatggagcgtgacgtcctcatc
ggacacggcgccgcgatgctgctcatagagagactgctcgaggagagcgacaagaccgag
gtatgggtctgcgagagctgcggacacctggcactcgaggacaagcgcagaggaaaggtc
tactgcccggtctgtggagaggaagagaagatcagcaaggtggagatgagctacgccttc
aagctgctgctcgacgagctgaaggctatgggaataaggccgtccctcaagataacggat
agggtgtga
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