Thermococcus sp. 4557: GQS_03960
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Entry
GQS_03960 CDS
T01588
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
the
Thermococcus sp. 4557
Pathway
the03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
the00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GQS_03960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
the03021
]
GQS_03960
Enzymes [BR:
the01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GQS_03960
Transcription machinery [BR:
the03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
GQS_03960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
SMC_ScpA
Motif
Other DBs
NCBI-ProteinID:
AEK72693
UniProt:
G0HNZ5
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All DBs
Position
768145..769320
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AA seq
391 aa
AA seq
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MVAAKTIKSLVDKADLPENLREELYNKLVEYNKKYKLKKAEIEAIIEETVREYQNALVEP
GEAIGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTLGLPRIIEIVDARKNPSTPIMTVYL
DEKHRYDREKALEVARRIEGTTLENLAREMSIDILNYEFVVDIDLERLEKAGLDMEKVQR
KLEGSFKSAEFEVDGYTLIMRPKKVGKLSDLRRLAEKVKKHRLKGLSGVGKTIIRKEGDE
YVIYTEGSNFKQVLKVPGVDPTRTRTNNIWEIADVLGIEAARNAIIEEIVNTMREQGLEV
DVRHIMLVADMMTLDGVILPIGRHGIVGEKASVLARAAFEITTQHLFEAAERGDEDPLNG
VVENVLIGQPVPVGTGMVKLAMNLPLRPKRE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcagcgaagaccatcaagagcctggtggacaaggcggacctcccggagaacctc
agggaggagctctacaacaagctggtcgagtacaacaagaagtacaagctcaagaaggcg
gagatagaggccatcatcgaggagaccgtccgcgagtaccagaacgccctcgtcgagcct
ggagaggcgataggtaccgttgccgcacagtctatcggtgagccgtcaacccagatgacc
ctcaacaccttccactacgcgggtgtcgcggaaatcaacgtcaccctcggtctgccgaga
atcatcgagattgtcgacgcgaggaagaacccatcaacgccaatcatgaccgtttacctc
gacgagaagcaccgctacgacagggagaaggccctcgaggtcgcgaggaggatcgaaggt
accaccctggaaaacctcgcccgcgagatgagcatcgacatactcaactacgagttcgtc
gttgacatagacctggagaggcttgaaaaggccggtctggacatggagaaggtccagagg
aagctcgagggctctttcaagagcgctgagttcgaggttgatggatacacgctcataatg
aggcccaagaaggtaggcaaactctcagacctcaggagacttgccgaaaaggttaaaaag
caccgccttaaaggcctctcgggcgtcgggaagaccatcataaggaaggaaggcgacgag
tacgtcatctacaccgagggctcgaacttcaagcaggtgctcaaggtcccgggcgttgac
cccacgaggaccaggacgaacaacatctgggagatcgccgacgtgctcggcatcgaggcg
gcaaggaacgccatcatagaggaaatcgtcaacacgatgcgcgagcagggtctcgaggtt
gacgtcaggcacatcatgctcgtcgccgacatgatgacgctcgacggtgtgatactgccc
ataggcaggcacggtatagttggggagaaggccagcgtgcttgccagggctgccttcgag
ataaccacccagcacctcttcgaggccgctgagaggggcgatgaggaccccctcaacggt
gtcgtggagaacgtgctgataggacagccggttccagtcggaaccggaatggtcaaactg
gcaatgaatctccccctgagaccgaaaagggagtag
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