Thermococcus sp. 4557: GQS_05305
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Entry
GQS_05305 CDS
T01588
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
the
Thermococcus sp. 4557
Pathway
the03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
the00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GQS_05305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
the03400
]
GQS_05305
Enzymes [BR:
the01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
GQS_05305
DNA repair and recombination proteins [BR:
the03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GQS_05305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Amidohydro_1
DUF2345
Ntox5
Motif
Other DBs
NCBI-ProteinID:
AEK72962
UniProt:
G0HJ33
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All DBs
Position
996321..997166
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AA seq
281 aa
AA seq
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MFKVDRLRFGTAGIPISTPKRSTIDGITHVRNLGLDAMELEFVRGVNIKPELAKKIKYVA
RKHDVLLTAHAPYYINLNAAEKAKVEASKKRIIQSAERLYDAGGWSVVFHAGYYLKQDPE
KVYERIKGEIKDIVSSLQDRGIEVWIRPELTGKPTQFGDLRELVRLSEEVEMVLPTIDFA
HAHARHAGKCNTAEEWREMLSLMEDRLGREALDNMHIHISGINYTSKGERNHLNLQESDM
NWEDLLRVLKEFRVKGVVISESPNIEGDAILMKKKYDEIRV
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaagttgacaggctgcgcttcggaacggccgggataccaatctcaaccccaaag
cgctcaactattgacggaataacccacgtgaggaacctcggcctcgatgccatggagctt
gagttcgtccggggtgtcaacatcaaaccggagctggcgaagaagataaaatacgtcgcc
agaaagcacgacgttctcctaaccgcccacgcgccgtactacatcaacctaaacgcggcc
gagaaggccaaggtcgaggccagcaagaagaggataatccagagcgccgagcgcctgtac
gacgcgggcggatggagcgtcgttttccacgccggttactacctcaagcaggacccggag
aaggtctacgaaaggataaagggcgagatcaaggatatagtgagcagtctccaggacagg
ggcatagaggtgtggataaggcccgagttgaccggcaagccgacccagttcggagacctg
agggagctggtgaggctgagcgaagaggttgagatggtcctgccgacgatagacttcgcc
cacgcccatgcaaggcacgctgggaaatgcaataccgccgaggagtggcgcgagatgctc
tccctgatggaggacaggctcggcagggaagccctggacaacatgcacatccacataagc
ggcataaactacacctcgaagggcgagaggaaccacctgaacctccaggagagcgacatg
aactgggaagacctgctgagggttctcaaggagttcagggtcaagggcgtcgtcataagc
gagagcccgaacatcgagggcgatgcaattctgatgaagaagaaatacgatgagatacgg
gtttaa
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