Thermococcus sp. 4557: GQS_10580
Help
Entry
GQS_10580 CDS
T01588
Name
(GenBank) DEAD/DEAH box RNA helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
the
Thermococcus sp. 4557
Brite
KEGG Orthology (KO) [BR:
the00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
the03019
]
GQS_10580
Messenger RNA biogenesis [BR:
the03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
GQS_10580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
DUF5814
Helicase_C
ResIII
AAA_25
ATPase
Motif
Other DBs
NCBI-ProteinID:
AEK74009
UniProt:
G0HPN9
LinkDB
All DBs
Position
1983937..1986552
Genome browser
AA seq
871 aa
AA seq
DB search
MLFVVRPGRKKNELEAFFIENEPEKLTAMKNLKAERIYRFIMREGRLFKVLEGSQYRNPK
EIEKLLRQARIVLVNADEWEDYFRRRLQNKRVERAELCRLCLLDGRITVLTEGNRIKYHG
EYICERCAEDELKRELRFRFKSVAMFDQAKKLLDRFRDLDKVLYAFDPRFDPTRHPEITK
WDELKAKHVRVEKIHIDELPLPERFKSVLKAEGVNELLPVQSLAIKNGLLEGESLLVVSA
TASGKTLIGELAGVPRAMKGRKMLFLVPLVALANQKYEDFKRRYSKLGLRVAIRVGMSRI
KTRDELVVVDTGIDADIIVGTYEGVDYLLRAGRKIGNVGTIVIDEIHTLDDEERGPRLDG
LIARLRKLYPSAQFIGLSATVGNAGELAKELGLKLVLYDERPVDLERHIIIARNESEKWR
HIAVLCRAEAMRKSRQGYKGQTIVFTFSRKRTHELAAYLTSKGLKAKPYHSGLPYKQRKL
TEMEFLAQRLDVVVTTAALGAGVDFPASQVIFESLAMGNKWLSVREFHQMLGRAGRPLYH
EKGRVYLIVEPGRKYSAQMESSEDEVAFKLLIAPIEPVLVEWSDELEQDNVLAHSCVFNR
LDVIEDVQSKCLGANQSAEKVLEKLGEHGFVRLKGPSVEVTPYGRAVSMSFLLPKEASFI
RNNLGKKPARWIAVKLLPFENLYLSGTLQRELEGAVRGRLSANVFSPSFASILDELDRVI
PELSPNAAERLFTLYQEFFMCPEDDCTDYAMERVSDMIIELRRSGKHPTQIAEHFRKVYG
LIVYPGDVFTWLDGIVRKLEAIERIARVFRVRNTEEEAKVLKREIEEGRTIRRDRGDNRG
YHRSSGMRDREKSRGRNQTRKGMNGRRKGPG
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcgtcgtgagacctggaaggaagaagaacgagcttgaggcattcttcatcgag
aacgagcccgaaaagctcaccgccatgaagaacctgaaggccgagaggatataccgcttc
ataatgcgagagggaaggctcttcaaggttcttgagggcagccagtatcgcaatccgaag
gaaatcgagaagcttcttcgtcaggccagaatcgtccttgtgaacgccgacgagtgggag
gactacttcaggaggaggctccagaacaagagggttgaacgcgccgagctctgccgcctc
tgcctcctcgacggcaggataaccgtcctcaccgagggcaaccgcattaaataccacggc
gagtacatctgcgagcgctgtgccgaggacgagctgaagagggagctccgcttcaggttc
aagagcgttgccatgttcgaccaggcgaagaagctcctcgaccggttcagagacctggat
aaagtcctctacgccttcgacccccgcttcgacccgacgaggcatccggagataaccaag
tgggatgaactgaaggccaagcacgtgcgcgttgagaaaatccacatcgacgagctcccg
cttcccgagaggtttaaatccgttcttaaggcggaaggcgttaacgagctcctcccggtc
cagagcctggcgataaagaacggcctccttgaaggcgagagcctcctcgtggtttccgcc
actgccagcggcaaaaccctcatcggcgagctggccggtgttccgagggccatgaaaggc
cggaagatgcttttcctcgtcccacttgtcgctctggccaaccagaagtacgaggacttc
aagaggaggtattcgaagctcgggctgagggtggcgataagggttggaatgagccgcata
aagacccgggacgagcttgtggtcgttgacacgggcatcgatgcggacatcatagtggga
acctatgagggcgttgactacctcctcagggcggggaggaagatcggcaacgttggaacc
atagtgatagacgagatacacaccctcgacgacgaggagcgcgggccgaggcttgacggt
ttaattgcgaggctgaggaagctctatccgagcgcgcagttcatcggcctctccgcaacc
gttggaaacgccggcgaactggcgaaggagctcgggctgaagctggtgctctacgatgag
aggccggttgacttggagaggcacatcatcatagcgagaaacgagtccgagaagtggcgc
cacatagcggttctctgccgggcggaggcgatgagaaaatcccggcagggctacaagggg
cagacgatagtcttcaccttctcgcgcaagaggacgcacgagcttgccgcttacctcacg
agcaaaggcctgaaagccaagccctaccactccggcctgccctacaagcagaggaagctc
accgagatggagtttttagcccagaggctcgacgttgtggtcaccacagccgcccttggg
gccggtgttgactttccagcgagccaggtcatcttcgagagcctcgcgatgggcaacaag
tggctgagtgtgagggagttccaccagatgctcggaagggcaggaaggccgctctaccac
gagaagggcagggtatatctcatcgtcgagcccgggaggaagtattccgcccagatggaa
agctcggaggacgaggttgcattcaagctcctcatcgcaccgattgagcctgtcctcgtc
gagtggagcgacgagcttgagcaggacaacgtcttagcccattcctgcgtcttcaaccgg
ctcgacgtcatcgaggatgtccagtccaaatgcctcggcgccaaccagagtgcggaaaag
gtcctcgaaaagcttggggagcacggctttgtccggcttaaagggccgtccgtggaggtc
accccctacggaagggccgttagtatgagctttctcctgcccaaggaggcgtccttcata
aggaacaacctcggaaagaagcccgcccggtggatagccgtcaagcttttgccgttcgag
aacctctacctgagcggaacgctccagagggagcttgagggtgcagtgaggggaagactg
agtgccaacgtattctcgccgagctttgcctcgatccttgatgaacttgaccgggttatc
cccgaactcagccccaacgccgccgagaggctcttcacgctctaccaggagttctttatg
tgccccgaggacgactgcaccgactacgcgatggagcgcgtgagcgatatgataatcgag
ctgaggaggagcggtaagcaccccacgcagatagcggagcacttcaggaaggtctatgga
ttgatagtctatcccggagacgtcttcacgtggctcgacggcattgtaaggaagcttgag
gcgatagagagaatcgcgagggtcttccgcgtgaggaacaccgaggaggaggcaaaggtc
ctgaagagggagattgaggagggcagaacgatacgcagggaccgcggggacaacagaggt
taccataggtcttcaggcatgagagaccgggaaaaatcgagaggacggaaccagactcga
aaagggatgaacggtaggaggaaggggccgggctga
DBGET
integrated database retrieval system
