Thermosynechococcus sp. CL-1: FFX45_02030
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Entry
FFX45_02030 CDS
T06232
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
thec
Thermosynechococcus sp. CL-1
Pathway
thec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FFX45_02030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thec03019
]
FFX45_02030
03400 DNA repair and recombination proteins [BR:
thec03400
]
FFX45_02030
Enzymes [BR:
thec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FFX45_02030
Messenger RNA biogenesis [BR:
thec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FFX45_02030
DNA repair and recombination proteins [BR:
thec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FFX45_02030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
QEQ00276
UniProt:
A0A5C2M638
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All DBs
Position
complement(402036..403487)
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AA seq
483 aa
AA seq
DB search
MPDADIDLIQAALQQYWGYSELRSPQAEVMTALLQRRDALIVLPTGAGKSLCFQLPAVLQ
GGLTLVISPLLALMENQITELQQRGLAAAAYHSELPSRQRRQILSHLRDYRLLYLSPESL
FSTPLWQHLCAAPIQLNGLIVDEAHCLVQWGDRFRPVYRRLGTVRPALRQCKPLHPRLAI
ATFTATADPKTQRTLIEVLGLEQPVQIIHSPYRANLHLAVRSVWSRGYRRHCLQQFLKQQ
GRTSGLIYARTRRDCETLATWLQEQGHRTTAYHGGLPAAQRRQIESDWLQDKLPFVVCTN
AFGMGVNKPNVRWICHYQPPLQLSEYLQEVGRAGRDGQPAQALALVSDRWGLDREDQQRW
HFFQRQSQDTYNRAMALQTHLPLRGNLPQLRQHFPEVELTLALLHQQGALRWQDPFHYCR
QPLAQVPPPPKDTQEQLMQEFLYHRGCRWQFLLQAFGFATEARGLRCGHCDRCRPANRTC
KIP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgccggatgccgatatagatctcatacaggccgccctacaacaatactggggctattct
gagttgcgatcgcctcaagcagaggtgatgacggcactcttacaacggcgggatgcctta
attgtcctccctactggagcgggcaaaagtctctgttttcagttgccagcagtgctgcag
ggcggattgacgctagtgatctcgccgctgcttgccctcatggaaaatcagatcactgaa
ttgcagcagcggggtctggcggccgcagcctatcatagtgaactgcccagccgccaacgc
cgccagattctctcgcacctaagggactaccgtttgctgtatctttcgccggagtcccta
ttttccacccccctttggcagcacctctgtgcagcaccgattcaactcaatggcttgatt
gtggatgaagcccattgccttgtacagtggggcgatcgctttcgacctgtttatcgtcgc
ttgggaaccgtgcggcctgccctgcgccaatgtaaaccactgcacccgcggctggcgatc
gctacctttactgccactgccgatcccaagacccagcgcaccctcattgaggttttaggt
ctagagcagcctgtgcagatcattcacagcccctatcgtgccaatctccatttagccgta
cgctctgtgtggagtcgggggtatcgccgccattgcctccagcaatttctcaagcagcag
ggcagaacctcaggcttgatctatgcccgcacccgccgcgactgtgaaacccttgccact
tggcttcaggagcaggggcaccgcaccaccgcttaccatggcggactgccggcagcacag
cgacgccaaatcgagagcgattggttgcaggataagctgccctttgtggtctgtaccaat
gcctttggtatgggggtgaataaacccaatgtgcgttggatttgccactatcagccaccc
ctgcaactcagtgaatacctccaagaggtgggacgcgctgggcgagatggccaaccagca
caggcactggccttggtgagcgatcgctggggtttagatcgcgaagaccaacagcgttgg
cacttttttcagcgccaaagtcaagatacctacaatcgcgccatggcacttcagacgcat
ctgcccctcaggggtaatcttccgcaactgcgacaacactttcctgaggtggaattgacc
ctagcattactgcatcaacagggggcactccgctggcaagacccttttcactattgccgt
caacccttagcacaggtgccaccgccgcccaaagacactcaagaacagttgatgcaagag
tttctctatcaccgcggctgccgctggcagtttctcctccaagcctttggttttgccact
gaggcaaggggattgcgttgtggccattgcgatcgctgtcggcctgcgaaccgcacctgt
aaaataccgtaa
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