Thermosynechococcus sp. CL-1: FFX45_05025
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Entry
FFX45_05025 CDS
T06232
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
thec
Thermosynechococcus sp. CL-1
Pathway
thec03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
thec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FFX45_05025 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thec03400
]
FFX45_05025 (uvrB)
DNA repair and recombination proteins [BR:
thec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FFX45_05025 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FFX45_05025 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_16
AAA_19
AAA_5
AAA_6
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QEQ00800
UniProt:
A0A5C2M9B3
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All DBs
Position
985390..987399
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AA seq
669 aa
AA seq
DB search
MTSTPFRIHAPFEPTGDQPQAIQKLVAGVQAGYRFQTLLGATGTGKTHTIARVIEALGRP
TLVLAHNKTLAAQLCNELRSFFPENAVEYFISYYDYYQPEAYIPVTDTYIEKSASINEEI
DMLRHSATRSLFERRDVIVVASISCIYGLGIPAEYLKAAISLEVGSEMDLRQLLRQLATI
QYTRNDVELGRGRFRVKGDVLEIGPAYEDRIIRVEFFGDEIEAIRYLDPLTGETLQSVER
LNIYPAKHFVTPAERLEAACAAIEAELQAQVAYLEAQNKLLEAQRLSQRTRYDLEMLRQV
GYCNGVENYSRHLAGRAAGEPPECLIDYFPEDWLLVVDESHVTVPQIRGMFNGDQARKKV
LIDHGFRLPSAADNRPLKAEEFWQKVKQCIFVSATPGDWELAVSEGQVVEQIIRPTGVVD
PEIFVRPTQGQVDDLYGEIRLRCDRQERVLVTTLTKRMAEDLTEYFQERGVRVRYLHSEI
NAIERIEILEALRQGDFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRAERSLIQTIG
RAARHVRGQAILYADTLTDSMQKAIQETERRRAIQLAYNQAHGITPQPIVKKTSNAILAF
LDVSRRLNAESVPVLSSQTLQELSLEDIPQLIQDLEAKMKAAAQELAFEEAARYRDQIKR
LRDRLVGHP
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcactccctttcgtattcacgctccctttgaaccgacgggagatcaaccccaa
gccattcaaaaactggttgcaggggtacaggcgggatatcgcttccaaacattgctgggg
gcaacgggcactggcaaaacccacacgatcgcccgcgtgatcgaggctcttggtcgccca
acccttgtgctggctcacaacaaaacccttgcggcgcaactgtgcaatgaactgcgctcc
ttctttccagaaaatgccgtcgagtactttatctcctactacgactactatcagcctgag
gcctacattcccgttaccgatacctacatcgaaaaaagtgcctcgattaatgaggaaatt
gatatgctgcggcactccgctacccgctccctctttgaacggcgggatgtgattgtggtt
gcctcgattagttgcatctacggcttgggtattccagcagagtacctcaaagccgcgatt
tccttggaggtgggcagtgaaatggatctgcggcaactactgcggcaattggcgacaatt
caatacacgcgcaacgatgtggaactggggcgggggcgcttccgtgtcaagggagatgtt
ttagaaattggcccagcctatgaggatcgcatcattcgcgtggagttttttggtgacgaa
atcgaagccatccgctatctcgatcccctgacgggggaaacattgcagagtgtcgaacgc
ctgaatatctatcccgcgaagcactttgtcacccctgccgaacgccttgaagcggcttgt
gctgccattgaagcggaactgcaagcccaagtggcttacttggaagcccaaaataaactc
cttgaagcacagcgcctgagtcaacgtacccgctatgacttggaaatgctgcgacaggtg
ggctactgcaacggtgtcgaaaactactcacgccatctcgcaggccgcgcagcgggggaa
ccgccggagtgtttgattgattattttcctgaggattggctgttggtggtggatgagtcc
catgtaacggtgccgcaaattcgcgggatgtttaatggcgaccaagcgcggaaaaaagtg
ctgattgatcacggctttcggttgcccagtgcggcggataatcgccccctgaaggcggag
gaattttggcaaaaggtgaagcaatgtatctttgtctcggcaacccccggcgattgggaa
ttggcggtgtctgaagggcaagttgtcgagcaaattattcggccgacgggggtcgtggat
ccagaaatttttgtccgtcccacccaaggacaggtggatgatctctatggggagattcgc
ctgcggtgcgatcgccaagagcgggtactggtgaccactctcacgaaacgcatggccgag
gatctcacggaatacttccaagaacggggggtacgagtgcgctatctgcactcagaaatc
aatgccattgagcgcattgaaattcttgaagccctgcgccaaggggactttgatgtgttg
attggtgtcaacctgttgcgggagggactggatttacccgaagtgtccttggtggccatc
cttgatgcagataaagagggcttcctgcgggcggagcgatcgctgattcaaaccattggc
cgtgctgcccggcacgtccgtggacaggcgattctctatgccgacaccctcaccgacagt
atgcaaaaagccatccaagaaacggagcgccgccgcgccattcaactggcctacaaccaa
gcccacggcattactccccagcccattgtcaagaaaaccagcaatgccatcttggccttt
ttggatgtgtctcgccgcctcaatgccgagtcggtgcctgtcttatcttcccaaacctta
caggaactgagcctagaggacatcccccaactgatccaagaccttgaggcgaaaatgaag
gcggctgcccaagaattggcctttgaggaggctgcccgctaccgcgatcaaattaagcgt
ttgcgcgatcgcctcgtggggcacccctag
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