Thermosynechococcus sp. CL-1: FFX45_05200
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Entry
FFX45_05200 CDS
T06232
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
thec
Thermosynechococcus sp. CL-1
Pathway
thec03030
DNA replication
thec03430
Mismatch repair
thec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FFX45_05200
03430 Mismatch repair
FFX45_05200
03440 Homologous recombination
FFX45_05200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thec03032
]
FFX45_05200
03400 DNA repair and recombination proteins [BR:
thec03400
]
FFX45_05200
Enzymes [BR:
thec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FFX45_05200
DNA replication proteins [BR:
thec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FFX45_05200
DNA repair and recombination proteins [BR:
thec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FFX45_05200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
Intein_splicing
Motif
Other DBs
NCBI-ProteinID:
QEQ00831
UniProt:
A0A5C2M6I2
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All DBs
Position
1013223..1015841
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AA seq
872 aa
AA seq
DB search
MSFVGLHIHSDYSLLDGASQLPDLVARAMELGMPAIALTDHGVMYGAVELLKLCRGKPLK
PIIGNEMYVINGDITKQERKPRFHQVVLAKNKQGYHNLCKLTTISHLQGFQGKGIFARPC
INKELLAQYRDGLIVTSACLGGEIPQAILQGKPDLARSVAAWYQETFGEDFYLEIQDHGS
QEDRVVNVELVRIGRELGIKIIATNDSHFISCNDVEAHDALLCIQTNKLLADEKRMRYSG
TEYLKSAAEMARLFRDHLPAEVIEEALANTLEVAEKIEPYNIFREPQSPEFPVPAGHTAD
TYLEQVAWQGLLERFHLSDRQQLDPTYRQRLEYELKMLQQMGFSNYFLVVWDYIKYARDH
NIPVGPGRGSAAGSLVAYALRITNIDPVHHGLLFERFLNPERKSMPDIDTDFCIDRREEV
IQYVTEKYGSDRVAQIITFNRMTSKAVLKDVARVLDIPYSQADQMAKLIPVVRGKPVKLA
VMISDDTPSPEFKEKYDSDPLVRRWIDMAMRIEGTNKTYGVHAAGVVIASEPLDQLVPLQ
RNNDGAVITQYFMEDLESLGLLKMDFLGLKNLTMIQKTRELIQKNHGKTLDLDVLPLDDA
KTYQILAEGKLEGIFQLESSGMRQIVRELKPSNLEDISSVLALYRPGPLDAGLIPKFINR
KHGREPIQYQHELLKPILQETYGVLCYQEQIMRMAQDLAGYSLGQADLLRRAMGKKKKEE
MEKHEALFIEGAAKNGVPSAVAQELFKQMLDFAEYCLSGETAVMTVEYGAVPIRRLVQEQ
LACQVYSLDPQGHLYTQPIAQWHFQGFRPVYEYELEDGSTICATPDHRFMTTRGQMLPIE
QIFQEGRELFQFAIAPSTALAQGLKPAVQMSR
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgtcggtctgcatattcacagtgattacagtcttctggatggtgcaagtcag
cttcccgacctagtggcacgggcaatggaattggggatgcccgcgatcgccctcacggat
cacggggtgatgtacggcgccgttgagctgttaaagttgtgtcgcggcaaacccctgaag
ccaatcattggcaatgagatgtacgtcatcaatggcgacatcaccaagcaggagcgcaaa
ccccgctttcaccaagtggtgctggccaaaaataaacagggctaccacaacctctgcaaa
ctcaccaccatctcccacctccagggcttccaaggcaaaggcatttttgctcgcccctgc
atcaacaaagaactcttggcacaataccgcgacggactcattgtcaccagtgcttgcctc
ggcggtgagattccccaagccattttgcagggtaagccggatttggcacgcagtgttgct
gcttggtatcaagagacctttggtgaggatttttaccttgagatccaagaccacggcagt
caagaggatcgggtggtcaacgttgaactggtgcgcattggccgcgagttggggatcaaa
attattgccaccaatgactcccactttatctcctgtaatgacgttgaagcccacgacgct
ctactttgtatccagaccaacaagctgctcgccgatgagaagcggatgcgctacagcggt
acggaatacctgaaatccgccgctgaaatggctcgcctgtttcgggatcacttgcccgct
gaggtcattgaagaggctttggcgaatacccttgaagtggccgaaaagattgaaccctat
aacatctttcgtgaaccccaaagtccagagtttccggtgcctgctggtcatacagccgat
acctacctagagcaagtggcgtggcaaggactgttggagcgatttcacctcagcgatcgc
cagcagttggatcccacctaccggcagcgactggaatatgaactgaaaatgctgcaacag
atggggttctcgaactatttcctcgtggtttgggactacatcaaatatgcccgcgaccac
aatattcccgtcgggccagggcggggatcggcggcgggttcccttgtggcctatgccctg
cgcattaccaacattgatcccgtacaccacggcttgctctttgagcggtttttgaacccg
gagcgcaagtccatgcccgatattgatacggacttctgcattgaccgccgcgaggaggtg
atccagtacgtcaccgaaaaatacggcagcgatcgcgtcgcccagatcatcaccttcaac
cgcatgacctcaaaggcggtgctcaaggatgtggcacgggtgctggatattccctatagc
caagcggatcaaatggcaaagctgattcccgtggtgcggggcaaaccggtcaaattggcg
gtgatgatctccgatgacaccccctcgccagaattcaaggaaaagtacgacagtgatccg
ctggtgcgccgctggattgatatggcgatgcgtattgaaggtaccaacaaaacctatggc
gtccatgcggccggcgtcgtcattgcctcagaacccttggatcaactggtgccgctgcaa
cgcaataacgatggggcggtgattacccagtatttcatggaggatctggaatcccttggc
ctcctgaagatggactttttgggtctcaagaacctgacaatgatccaaaaaacgcgggag
ttgatccagaaaaaccacggtaaaacccttgatttggatgtcctccccctcgatgatgcc
aagacttaccaaatccttgctgaaggcaaactggaggggatcttccaattggaatcttcg
gggatgcgccaaattgttcgagaactgaagccctcaaatttggaggacatttcctcggtg
ctggcactctatcgaccgggaccgttggatgcaggcctgatccccaaattcattaaccgc
aagcatgggcgggaacccattcaatatcaacatgagcttttgaaacccattttgcaggaa
acctacggcgttctttgttatcaggagcagatcatgcggatggcgcaggacttggcgggc
tattctctgggtcaagcggatctgctccgccgcgcgatgggcaaaaagaaaaaagaggaa
atggaaaaacacgaagccctcttcattgagggagcggcgaaaaatggggtgcccagtgcg
gtggcccaagaactctttaagcagatgctggattttgctgaatactgtctgagtggggag
acggcggtgatgacggtggaatatggggctgtcccgattcgccgcttggtgcaggaacag
ttggcctgtcaggtctacagccttgatccccaagggcatctttatacccagcccattgcc
caatggcactttcagggcttccgtcccgtgtatgagtatgaacttgaggatggctcaacg
atttgtgcgacacctgatcaccgctttatgaccacccgtggccagatgctgcccattgag
caaatttttcaggaaggacgagagctattccaattcgcgatcgcccccagtacggcgctg
gctcaaggtctcaaaccagcggtgcagatgagccgctag
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