Thermosynechococcus sp. CL-1: FFX45_10160
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Entry
FFX45_10160 CDS
T06232
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
thec
Thermosynechococcus sp. CL-1
Pathway
thec03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
thec00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FFX45_10160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thec03021
]
FFX45_10160
03400 DNA repair and recombination proteins [BR:
thec03400
]
FFX45_10160
Enzymes [BR:
thec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FFX45_10160
Transcription machinery [BR:
thec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FFX45_10160
DNA repair and recombination proteins [BR:
thec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FFX45_10160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
QEQ01702
UniProt:
A0A5C2M8B2
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All DBs
Position
complement(2058570..2060438)
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AA seq
622 aa
AA seq
DB search
MPRIEQRFDYVKVSLASPERIIQWGQRTLPNGQVVGEVTKPETINYRTLKPEMDGLFCER
IFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAPVTHVWYLKGI
PSYMAILLDMPLRDVEQIVYFNSYVVLNPGNHPSLSYKQLLSEDQWQEIEEEIYSEDSEL
EGIEVGIGAEAIQRLLQDLDLQKEADQLRQEILNSKGQKRAKLIKRLRVIDNFIATGAKP
EWMVLTVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVRN
EKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRSV
IVVGPKLQMHQCGLPREMAIELFQPFVIHRLIRQQIVNNIKAAKRMIQRNDPQIWDVLEE
VIEGHPVLLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLSI
EAQAEARMLMLASNNILSPATGKPIITPSQDMVLGCYYLTAENPKLPDYSDRYYANFQDV
VMAYEQGHLPLHAFVWVRYDGEVDDGDSSEPQITTYEDGSRLLEYSLRRVKEDANGQLIS
QYIRTTPGRIIYNQTIQEALAS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcccagaatcgagcaacgctttgattatgtaaaagtgtctctcgcgtcaccggagcgc
atcatccaatgggggcagcgcacgctccccaacggtcaagtggtgggcgaggtgactaaa
ccagaaaccattaactatcgcaccctcaagccagagatggacggcctcttctgcgagcgg
atttttggtcctgctaaggattgggagtgccactgcggtaaatacaagcgggtgcgccat
cgtggcattgtctgcgaacgttgtggcgttgaagtcaccgaatcgcgggtgcgccgccat
cgcatgggctacattaagttggctgccccagtgacccatgtttggtatctgaaggggatt
cccagctacatggcgatcctgctggatatgcccctgcgggatgtggagcaaattgtctat
ttcaattcctatgtagtgctcaatcccggcaatcaccctagcctcagctacaagcagctc
ctaagcgaagatcagtggcaggaaattgaagaagagatctacagcgaagactcggagcta
gagggtattgaggtgggcattggggctgaagccattcaacgcctacttcaggatttagat
ctgcaaaaagaggccgaccaactgcggcaggaaatcctcaactccaaggggcaaaaacgc
gccaagctcatcaaacggctgcgggtcattgacaacttcattgccactggagcaaagcca
gagtggatggttttgacggtaattcccgtgattccaccggatctgcggccaatggtgcag
ttagatggtgggcgctttgccacctctgacctgaatgacctgtaccgccgcgtcattaac
cgcaacaaccgccttgcccgcctgcaagagattctcgcccccgagattattgttcggaat
gagaagcgcatgcttcaagaggcggtggatgccctgattgataatggtcgtcgcggtcgt
acggtagtgggcgccaacaaccgtcccctgaagtccctttccgacattattgaggggaaa
cagggtcgcttccgccaaaacctgctggggaaacgggtggactactccggtcgttcggtg
attgtggtggggccaaaactgcaaatgcaccagtgcggcctgcctcgggaaatggccatt
gaactcttccagccctttgtgattcaccgcttgattcgccaacaaattgtcaacaacatt
aaggcagcgaagcggatgatccagcgcaatgacccccaaatttgggatgtgctagaggag
gtgattgagggtcacccggtgctgctcaaccgggcgccaaccctccaccgtttggggatt
caggcctttgagccaattctggtggaagggcgtgccattcaactgcaccccttggtgtgt
cctgccttcaacgccgactttgacggggatcaaatggcggtgcacgtccccctctcgatt
gaggcccaagcggaggcgcggatgctgatgctagcctcaaataatattctgtcgccggcc
acgggcaagccgattattacccccagccaagacatggttttgggctgctattacttgaca
gcagaaaatccgaagctgccagattatagcgatcgctactatgccaacttccaagacgtg
gtcatggcctacgaacagggacacttgccgctccatgcctttgtctgggtgcgctacgac
ggtgaggtggacgatggcgacagcagtgaacctcagattacgacctatgaagatggttcc
cgtttactggagtattccctgcggcgagtcaaggaggatgccaacggtcaactgatttcc
caatacatccgcaccacccccggtcgcatcatctacaaccaaacgattcaagaagcccta
gccagttaa
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