Thermosynechococcus sp. CL-1: FFX45_10225
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Entry
FFX45_10225 CDS
T06232
Name
(GenBank) VacB/RNase II family 3'-5' exoribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
thec
Thermosynechococcus sp. CL-1
Brite
KEGG Orthology (KO) [BR:
thec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thec03016
]
FFX45_10225
Enzymes [BR:
thec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
FFX45_10225
Transfer RNA biogenesis [BR:
thec03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FFX45_10225
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QEQ01713
UniProt:
A0A5C2M8I2
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All DBs
Position
2077059..2079089
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AA seq
676 aa
AA seq
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MEKGTLIEFRVNNQRRLAVIDRPEGKKHWIAIDQHLQAHTIHPRQLTFTVPEERFRPQEI
PTFWQQVQPLLDADSLEVAWEIIREENRAITPADLAELLFSERSAVACYAAYYLLSEDRF
YFKLKGETYEARPAAQVAELKHQREREAQRLAEEVSFREHLTQALKGETVAWSASDRKRL
EQLERYAIAIEPSGQHQAAIDLLSELQRPTQPLGAFQLLVDLGLWSEHENLFLRRSQIDV
EFSAKVLAVAHERLTSPPTDIDAPLRRDLTHLKVYTIDDESTQEIDDGLSLEVVGDRQKL
WIHIADPTRWVMVDDVLDQEARRRATTVYLPTGMIPMFPTELATGPMSLVAGQTCCALSF
GILLADNGEVLEYEICPSWIRPTYRLSYDDVDMILEQGVTGEADLLAIAQWGQRRSEWRQ
QRGAIRIHIPEPNIKVAGEEVEISPLHDSPARQLVAEMMILAGEVAAHFGAREGIPLPFR
SQSPPELPSEEELLQLPAGMVRDCAIRRCMPRSEMSTQPNPHASLGLDAYCQVTSPIRRY
TDLLAHRQIKAHLRGETPPLTPEQLNEILLGLVSSVQESSLVERQTNRYWCLEYLRRHRE
EVWRGILLRWLRPEEGLGLVLLEDLGVELAMRFQRQANLGECVLVRVSRVDPRSDQIWLE
EVPAEAPMPTETVALS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
gtggagaaaggcaccctcattgaatttcgggtcaataaccagcgtcgcttggcggtgatc
gatcgccccgaaggtaaaaagcattggattgccattgatcagcatttgcaagcccacacc
attcatccgcgccaactgacctttacggtgcccgaggagcggtttcgtccccaagagatt
cccacattttggcagcaggtgcagccgctcttggatgccgacagtttagaagtggcttgg
gaaattatccgcgaggaaaatcgcgccattacgccagcggatctagcagagctgcttttt
tcggagcgatcggcggtggcctgctatgcggcctactatctccttagtgaggatcgtttc
tacttcaagctcaagggggaaacctacgaggctcgaccggctgcccaagtggcagaactc
aaacatcaaagggagcgggaagcccaacgcttggcggaggaagtcagcttccgtgaacat
ttgacccaagccctgaagggggaaactgtggcgtggtctgccagtgatcgcaagcgcctt
gagcagttagaacgttatgctatagccattgaacccagtggccaacaccaagcagccatt
gacctcctcagtgaattgcagcgtcccacccaacccttgggcgctttccaactgttggtg
gatctcggcctctggtcagagcacgaaaatctgttcctgcgccgtagtcaaattgacgtt
gaattctctgccaaggtacttgctgtggcccatgaacgcctcacctcaccccccacagat
attgacgctcccctgcgccgcgatctcacccatctcaaggtctataccattgacgacgaa
agtacccaagaaattgacgatggcctcagcctcgaagtcgtgggcgatcgccaaaagctg
tggatccacattgccgatcccacccgctgggtgatggtggatgatgtcttggatcaggag
gctcgccgccgcgccacaacggtctatctgccgacggggatgattcccatgtttcccacg
gagttggccacaggaccgatgagtttggtggcgggacaaacctgttgtgccctgagtttt
ggcattcttttagccgacaacggcgaagtgctggagtacgaaatttgccccagttggatt
cgccccacctatcgcctgagctatgacgatgtggacatgattttggagcagggggtgacc
ggggaagcggatctgctggcgatcgcccaatggggacagcggcgtagtgagtggcggcaa
caacggggagcgattcgcattcatatccctgaacccaacattaaagtggctggtgaagag
gtggaaatctcgcccctccatgactcccccgcccgccaactggtggcagaaatgatgatt
cttgccggtgaagtagccgcccattttggcgcccgtgagggcatccctctgccctttcgc
agtcaatcaccgccagaactgccctcagaggaggaattgttgcaactgcccgctggaatg
gtgcgggactgtgccattcgtcgctgtatgccccgcagtgaaatgagcacccaacccaat
ccccatgccagccttggccttgatgcctactgccaagtgacttcccccattcgccgctac
acggatttgctggcgcaccgtcagattaaagcccacctccgcggggaaaccccacccctc
acacccgagcaactgaatgaaattttattggggctggtgtcgtcagttcaggagtcctcc
cttgtggagcggcagaccaaccgctattggtgcttggaatacctgcggcggcatcgcgaa
gaggtgtggcggggcattttactgcgttggttgcgtcctgaggaggggctggggctggtt
ctgctggaggatttgggggtagaactggcaatgcgctttcaacggcaggccaatttggga
gagtgtgtgttggtgcgggtgagtcgtgttgatccccgcagtgatcaaatttggctggag
gaagtgcctgctgaggcaccgatgcccacagaaaccgttgcattatcctga
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