Thermosynechococcus sp. CL-1: FFX45_11820
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Entry
FFX45_11820 CDS
T06232
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
thec
Thermosynechococcus sp. CL-1
Brite
KEGG Orthology (KO) [BR:
thec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thec03016
]
FFX45_11820
Enzymes [BR:
thec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FFX45_11820
Transfer RNA biogenesis [BR:
thec03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FFX45_11820
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QEQ01992
UniProt:
A0A5C2M935
LinkDB
All DBs
Position
complement(2400903..2401538)
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AA seq
211 aa
AA seq
DB search
MDLEFPLECFEYDLSATALAHFLNADQLAVDTETMGLNIPRDRLCLVQVCDPEGQVAVVK
IGRGQTEAPHLQQLLEHPRITKIFHYARFDLATLRYHLGIRVHPVFCTKVASKIARTYSP
RHGLKDLVLDLLGVEIDKSAQSSDWGNAMALREDQIRYAANDVRYLIPLRQQLTAMLKRE
ERFELFQTALSCLPAIVDLDLAGYTQVFEHG
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggatctggaatttccccttgagtgttttgagtacgacttgagtgctacagccttagcg
cactttctcaatgccgatcagttggccgtggatacggaaaccatgggcttgaatatcccc
cgcgatcgcctgtgtctggtgcaggtgtgtgaccccgaggggcaagtggccgttgtcaag
attggtcgtggccaaaccgaagccccccaccttcagcaactcctagagcacccccgcatt
accaaaatctttcactacgcccgctttgatctggccaccttgcgctaccatttggggatc
cgtgttcatcccgttttctgcaccaaagttgccagtaagattgcccgcacctattccccc
cgccacggccttaaggatttggttctggatctgttgggggtagaaattgataaatccgcg
caaagctccgactgggggaatgccatggcactgcgggaggatcaaatccgttatgccgct
aatgatgtgcgctatctaattcctctgcggcagcagctcacggccatgctgaaacgggaa
gaacgctttgagttattccaaacggctctgagttgtctacccgcgattgtcgatctggat
ttagcgggctacactcaagtctttgagcacggctag
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