Thermosynechococcus sp. CL-1: FFX45_12130
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Entry
FFX45_12130 CDS
T06232
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
thec
Thermosynechococcus sp. CL-1
Brite
KEGG Orthology (KO) [BR:
thec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thec03021
]
FFX45_12130
Transcription machinery [BR:
thec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FFX45_12130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_Crp_2
HTH_24
HTH_3
HTH_23
Sigma70_ECF
KORA
HTH_31
HTH_1
HTH_11
HTH_8
HTH_17
MarR_2
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QEQ02051
UniProt:
A0A5C2M9P4
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All DBs
Position
2467704..2468498
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AA seq
264 aa
AA seq
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MSNRALSTDHTDLKGSTLSLLQAYQDNPARELRNRLVELNMGLVRKEAHRWVQCTQESFD
DLMQVGTLGLIHAIERFDQSKGVAFSSFAIPYIRGEIQHYLRDKSPQIRVPRRWQTLQSQ
AKRVIQELRQQLQRPPSDSEIAQALDVPLEEWQAAKFANYHTTPVSLDAPTFEGEEDAVS
LGDIVPDQRYQSFQLAQEDRIRLQQCLQKLEARTCQILEFVFLYDLSQKETAERLGLSAV
TVSRQIKKGLQALQRMMSHDEAES
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatagggcactgagtactgatcatactgacctaaagggttctaccttgtctctg
ttgcaggcataccaagacaaccctgcacgcgaattgcggaatcgccttgtcgagttgaac
atgggactggtacgcaaggaagcccatcgctgggtacagtgcacccaagaaagctttgac
gacctgatgcaagtgggcacccttggcctcattcacgccattgaacgctttgatcaaagt
aagggagtggcctttagttcctttgccattccctacattcgcggtgagattcaacactac
ctgcgggataaaagtccgcaaattcgcgtcccccgtcgttggcaaaccctccaaagccaa
gcaaagcgagtcattcaggagttacgccaacaactgcagcgtccccccagcgatagtgaa
attgcccaagccctcgatgtcccccttgaagaatggcaagcggcaaaatttgccaactac
cacaccaccccggtcagcctagatgcccccacctttgagggtgaggaagatgctgtttcc
ctcggtgacatcgtgcccgatcaacggtaccaaagttttcaactcgcccaagaagatcgc
attcgtttgcagcagtgtctgcaaaaactagaagcccgcacctgtcagattctggaattt
gtctttttgtacgatttgagtcaaaaagaaaccgctgaacgcttgggtctaagtgcggtc
acagtctctcgccagattaaaaaaggcctccaagccctacaacggatgatgagtcacgac
gaggctgaatcctga
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