Thermoanaerobacterium sp. RBIITD: SAMN05660242_0548
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Entry
SAMN05660242_0548 CDS
T10458
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
thed Thermoanaerobacterium sp. RBIITD
Pathway
thed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMN05660242_0548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thed03019
]
SAMN05660242_0548
03110 Chaperones and folding catalysts [BR:
thed03110
]
SAMN05660242_0548
03029 Mitochondrial biogenesis [BR:
thed03029
]
SAMN05660242_0548
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
thed04147
]
SAMN05660242_0548
Enzymes [BR:
thed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SAMN05660242_0548
Messenger RNA biogenesis [BR:
thed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SAMN05660242_0548
Chaperones and folding catalysts [BR:
thed03110
]
Heat shock proteins
HSP60 / Chaperonin
SAMN05660242_0548
Mitochondrial biogenesis [BR:
thed03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SAMN05660242_0548
Exosome [BR:
thed04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SAMN05660242_0548
Exosomal proteins of other body fluids (saliva and urine)
SAMN05660242_0548
Exosomal proteins of breast cancer cells
SAMN05660242_0548
Exosomal proteins of colorectal cancer cells
SAMN05660242_0548
Exosomal proteins of bladder cancer cells
SAMN05660242_0548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-ProteinID:
SNX53056
LinkDB
All DBs
Position
I:complement(551849..553477)
Genome browser
AA seq
542 aa
AA seq
DB search
MAKQIKYGEEARRALERGVNAVANTVKVTLGPRGRNVVLDKKYGSPTITNDGVTIAREVE
LEDPFENQGAQLLKEVATKTNDVAGDGTTTATVLAQAMVLEGLRNLAAGANPMLLRRGMA
KAVDAAVEGLKRISKQVEGKDSIAHVASISAADEEIGNLIAEAMEKVGKDGVITVEESKT
MGTTLDVVEGMQFDRGYVSPYMVTDTEKMEAVLDDPVILITDKKLSNIQDLLPLLEQVVQ
QGKKLLIIADDVEGEALATLVVNKLRGTFTCVAVKAPGFGDRRKEMLQDIAILTGGQVIS
EELGFDLKETKIEMLGRARQVKVTKENTTIVDGAGNSADIKNRVNQIKVQIEETTSDYDR
EKLQERLAKLSGGVAVIQAGAATETELKEKKHRIEDALSATRAAVEEGIVPGGGTALLDV
IPDVQKVVDSLEGDFKTGAQIVLRALEEPVRQIASNAGVEGSVIIEKIKASNDVTFGYDA
YKEEFVDMFKAGIVDPTKVTRSALQNAASVASMILTTEAVVADIPEKNPPAPAAPGAGMD
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacagataaaatacggtgaagaagcaagaagggcccttgaaagaggtgtcaat
gcagttgcgaatacagtcaaagtgacattaggaccaagaggtcgtaatgtagttcttgat
aaaaaatatggttcacctacgattacaaatgatggtgtaacaattgcaagagaagtggaa
ttagaagatccatttgaaaatcaaggtgcacaacttttaaaagaagttgctacaaagaca
aatgatgttgctggtgatggtactacaacagctacagtattagcacaagctatggtttta
gaaggattaaggaacctagctgctggtgcaaatccaatgcttctaagacgcggcatggca
aaggctgttgatgcggctgttgaaggcctaaaaaggatatctaaacaagttgaaggaaaa
gattcaatagcacatgttgcttcaatttctgctgctgatgaagaaataggcaatttgatt
gctgaagcaatggagaaagtaggaaaagacggagttataacagtagaagagtcaaagaca
atgggaacaacccttgatgttgttgaaggtatgcagttcgacagaggttatgtatcacca
tatatggtaacagatacagaaaaaatggaagcagttcttgatgatccagtaatacttatt
acagataaaaaattatcaaatatccaagatttactgccattgcttgaacaagttgtacaa
caaggtaaaaaacttcttattatagcagatgatgtcgaaggtgaagcacttgcaacgctt
gttgtgaataaattaagaggtacatttacatgtgttgcagtaaaagcacctggctttggc
gacagacgtaaagagatgttacaagatatagctattcttacaggtggacaggtaatctca
gaagaactcggatttgaccttaaagaaacaaagattgagatgcttggacgtgcaagacag
gttaaagttacaaaagaaaatacaactattgtcgacggtgctggtaattccgctgacatt
aagaatagagtaaatcagattaaagttcaaatagaagagacgacatctgattatgataga
gaaaaattacaagaaagacttgcaaagctttcaggtggcgttgcggtaattcaagctggt
gctgcaacagaaacggagttaaaagaaaagaaacatagaatagaagatgcactttcagca
acaagagcagctgttgaagaaggtattgtaccgggtggcggtactgcattactcgacgtc
atacctgatgttcaaaaagttgttgattcattagaaggcgattttaagacaggtgctcaa
atagtattaagagctcttgaagaaccagtaagacagattgcttcaaatgctggtgttgaa
ggttctgtgattattgaaaaaataaaagcttcaaatgatgtaacatttggctatgatgca
tacaaagaagaatttgtagatatgtttaaagcaggaattgttgacccaacaaaggttaca
aggtcagcattacaaaatgcagcatctgttgcatcaatgattcttacaacagaagcagtt
gttgcagatatacctgaaaagaatccacctgcaccagcagcacctggcgctggaatggat
atgatgtaa
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