Thermoanaerobacterium sp. RBIITD: SAMN05660242_0630
Help
Entry
SAMN05660242_0630 CDS
T10458
Name
(GenBank) exodeoxyribonuclease V alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
thed Thermoanaerobacterium sp. RBIITD
Pathway
thed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SAMN05660242_0630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thed03400
]
SAMN05660242_0630
Enzymes [BR:
thed01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SAMN05660242_0630
DNA repair and recombination proteins [BR:
thed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SAMN05660242_0630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
Helicase_RecD
PhoH
SLFN-g3_helicase
nSTAND3
PIF1
NPHP3_N
HHH_2
AAA_22
KAP_NTPase
UvrD-helicase
UvrD_C
NTPase_1
MeaB
AAA
AAA_28
ATPase_2
Rad17
ATPase
RsgA_GTPase
AAA_23
T2SSE
DEAD
ABC_tran
AAA_12
Zeta_toxin
AAA_29
TrwB_AAD_bind
AAA_14
Motif
Other DBs
NCBI-ProteinID:
SNX53134
UniProt:
A0A285BD31
LinkDB
All DBs
Position
I:complement(631041..633254)
Genome browser
AA seq
737 aa
AA seq
DB search
MVEIEGTVEEIIYKNDQNGYAVLEINSKEDSITVVGYMPYVGIGETLKIEGEWTTHPDYG
EQIKVSKYEMVAPATLYGMERFLSSGLIRGIGPVMAKKIVTKFGLESLNIIETHPERLTE
IPGIGDERVKMISESYEKQKGLREVMVFLQGYGISTTNAIKIYKQYGDDSINLIKQNPYR
LSDEIFGIGFRTADKIASSMGVDAHSAYRISSGARYVLMQYAANGHTYVPMDLLAKETAR
LLDVTEDEVNDSLVLLVQNGKAMFETFEDGSHGVYYIPYYTAETNTADKIMKMTLTDVKP
GDIDIKKEISKIENEMGIRLAENQKIAVEESIKNSILIITGGPGTGKTTIINFIIKLFKK
FGKSVALAAPTGRAAKRMSEATGYEAKTIHRLLEYSYSDEEGRGFGKDDKDPITEDVIII
DEASMIDILLMNALLKAIPLSSRLILVGDVDQLPSVGAGNVLRDIIDSGLVKVIRLKEIF
RQGKESLIVVNAHKINNGEYPTFNDKENDFFFINANSQEDILKIILDLNKRRLPDAYGFD
PMSDIQVLSPMRKGLIGVVNLNNELQKCLNPPKKGLNEKPMKDFIFRVGDRVMQIKNNYK
MKWVKGDEKGEGVFNGDMGVIESIDNDAQELNVYFDDDKYVKYDFSDIDELNLSYCVTVH
KSQGSEFPAVIMPMSFGPPMLLTRNLLYTAVTRAKKLVVIVGQEKYLKHMVDNNLISKRY
SGLLPKLRKALSFMVEN
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaatagaaggtacggttgaagaaataatatataagaatgatcaaaatggatat
gcagtacttgaaataaattcgaaagaagactccattactgtagttggatatatgccatat
gtcggtatcggtgagactttaaaaattgaaggcgaatggacaacacacccagattatggt
gagcagattaaggtttcaaaatatgaaatggttgcacccgcaacgctttatggcatggaa
aggtttctctcatcaggccttataagaggcataggacctgttatggctaaaaagatagtt
acaaaattcggtcttgaatcacttaatataatagagacacatcctgaaaggcttacagaa
ataccgggtataggcgatgaaagagtcaaaatgatatcagaatcctatgagaagcaaaag
ggacttcgtgaagtaatggtatttttgcaaggctatggcatatctactacaaatgccata
aagatatataaacaatacggagacgattcaataaacctaataaagcaaaatccgtatagg
ctatctgatgagatatttggcatcggatttcgtactgctgacaagattgcatctagtatg
ggtgtcgatgcacattcagcatataggatatcttctggtgcgagatatgttttgatgcaa
tacgccgcaaatggccatacatacgtacctatggatttgcttgcaaaagagactgcaaga
ttactcgatgtaactgaggatgaagtaaatgattcccttgtattattagtacaaaacgga
aaggctatgtttgaaacatttgaagatggatcacatggcgtttattacattccatattat
actgcagaaacaaatactgccgataaaataatgaagatgacattgacagatgtaaaacca
ggcgacatcgatataaaaaaagaaatatcgaaaatagaaaacgagatgggaataagatta
gctgaaaatcaaaaaatcgcagtagaagaatctataaagaattctatacttattataaca
ggtggtcctgggacagggaaaacgacaattataaactttatcataaaactttttaaaaag
tttggtaaatcagtagctttggcagctcctacaggaagagctgcaaaaagaatgagtgaa
gctacaggttatgaagcaaaaacaatacaccgattacttgaatattcctattcggatgaa
gaaggaagaggatttggcaaagatgacaaagatccaataacagaagatgtaataataatc
gatgaagcatctatgatagatattctcttaatgaatgctcttttaaaggctattccttta
agctcgaggctaatacttgtcggagatgttgatcaattgccatcagtaggtgccgggaat
gtattgagggatataatagacagtggtttagtaaaagtaataaggttaaaggaaattttt
cgccaggggaaagaaagccttatagttgtcaatgcccacaagataaacaatggagagtac
cctacattcaatgataaagaaaatgattttttctttataaatgcaaatagccaagaagat
atcttaaaaattattctggaccttaataaaaggagacttcctgatgcatacggttttgat
cccatgtcagacatacaagtattaagccctatgagaaaggggcttataggcgttgtaaac
ctcaataacgaacttcaaaaatgccttaacccaccaaaaaaaggattaaatgaaaaacct
atgaaagactttatatttagggttggcgatagagttatgcaaataaaaaataattacaag
atgaaatgggtaaaaggtgatgaaaaaggtgaaggggttttcaatggggacatgggagtt
atagagtctatcgacaatgatgcacaggaactaaacgtatattttgacgatgataaatat
gtaaaatacgatttttctgatatagatgagctaaatctttcatattgtgttacggttcat
aaaagccagggaagcgaatttcctgccgtaataatgcctatgagctttggcccaccaatg
ctattgacgagaaatcttttgtatacagctgtaacaagagccaaaaaattagttgtaatt
gtaggacaagaaaaatatttaaaacatatggtagataataacctaatatcaaaaagatat
tcgggtcttttgccaaaactaagaaaagcattaagctttatggtggaaaattga
DBGET
integrated database retrieval system
