Thermoanaerobacterium sp. RBIITD: SAMN05660242_1053
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Entry
SAMN05660242_1053 CDS
T10458
Name
(GenBank) DNA helicase-2 / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
thed Thermoanaerobacterium sp. RBIITD
Pathway
thed03420
Nucleotide excision repair
thed03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAMN05660242_1053
03430 Mismatch repair
SAMN05660242_1053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thed03400
]
SAMN05660242_1053
Enzymes [BR:
thed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMN05660242_1053
DNA repair and recombination proteins [BR:
thed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAMN05660242_1053
MMR (mismatch excision repair)
Other MMR factors
SAMN05660242_1053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
Viral_helicase1
DEAD
AAA_30
SLFN-g3_helicase
NACHT
nSTAND3
DUF6678
ATG16
ResIII
FNIP_C
AAA_11
Motif
Other DBs
NCBI-ProteinID:
SNX53501
UniProt:
A0A285BEQ2
LinkDB
All DBs
Position
I:complement(1095708..1097936)
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AA seq
742 aa
AA seq
DB search
MRALEHPSYSEEKQKLQKTIEWIEGEIAKSEEEGKILEKKISETRKEVKSALDERIVLQK
QLKMSNERKLRRYKESKSKPYFGRVDFKEDGDDKIKKLYIGKYGLSDEKHDEPVVIDWRS
PIADIYYSGEAGAVSYKSPSGEISGEIKLKRRYEIEEGELLNIFDEKLKEMILDDEFLTS
SLEKSADNRLKDIVATIQKEQNDIIRASLDKALIIQGVAGSGKTTIALHRMAYLIYQNQR
NKGREDYYMVIAPNKLFLNYISDILPDLGADDVLQTTFEDYALKITGIKGKLTVANDKIS
YLLGDAPIDEKRKTMMVSRFKGSLLFKSIIDNYFKQFLYKYIPDCDINIDGNIIFTSIEL
KKLFIENFVYLPLQKRKEQFISYLKNRLKKNKELIADGIERAYSEKIRYVKENIDDNELR
QSKVIELYDLRDREVGDIPAKIDKAINDYSEKWTQLDTVKIYRDIMNFETIKKLSHGKIE
DEKISYICDYTKAMLDKDKIENEDLAPLLYIHKYLFGLDDAGKFTHIVVDEAQDFSEFKF
YLIKEIVKGDSITIVGDVAQGIYSYRGIKSWDDLNNHVLNGKATYKMLKKSYRTTVEIME
YANSVIDKSKNKSIVKAEPIMRHGDVPEIVRIRDYDELIHDILNNLQNDELTTAIICKTD
EMTKKIYESLKKDIDDIALISDKTEVYKGRKIVIPSYLSKGLEFDTVMIPDADSYNDTEL
ELKLFYVAITRPLHKLKLYYME
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgagagcattagaacatccatcgtacagcgaagaaaaacagaagcttcaaaaaactata
gagtggattgaaggtgagatagcaaaaagtgaagaggaaggcaagatattagagaaaaag
atatctgaaactcgaaaggaagtgaagtcagcacttgacgaaaggatagttttacagaag
cagcttaagatgagcaatgaaagaaaacttagaaggtataaagaatcgaagagcaaaccg
tactttgggcgtgtcgactttaaggaagacggtgatgataagataaaaaaactctacatt
ggcaaatacggtttaagcgatgaaaagcacgatgaacctgtcgtcatcgattggcgatct
cctattgcagatatttattacagtggtgaagctggtgcagtatcttacaaatcacctagt
ggcgaaatatctggcgaaataaagttaaagaggaggtacgaaatagaagaaggtgaactt
ctcaatatttttgatgagaaattaaaagagatgatcttggatgacgaatttttaacgtcg
tctcttgagaagagtgctgataatagacttaaagacatagttgcaacgatacaaaaagag
caaaatgatattataagggcatcattagataaggctttgattatacaaggtgttgcagga
agtggaaagacgacaattgcacttcaccggatggcatatcttatttaccaaaatcagaga
aataaaggaagagaagattattacatggtaatagctccaaacaaactttttcttaattac
atatctgatattttgccggatcttggcgctgatgatgtcctgcagacgacatttgaagat
tatgcattaaaaattacagggataaaaggaaagctaacagtggcaaatgataaaatatca
tatcttttaggagatgcgcccatcgacgaaaaacgaaagactatgatggtatcaagattc
aagggaagcttgttatttaaatcaattatcgataactatttcaaacagtttttatataag
tacattcctgactgtgatataaatattgatggaaacattatttttacatcaatagagctt
aaaaagttatttattgaaaattttgtctacttgccattacagaaaaggaaagagcagttt
atatcgtatttgaagaatagactaaagaaaaataaggaattaattgcagacggtattgaa
agggcgtatagcgaaaaaatcagatatgttaaggaaaatattgatgacaatgagttaagg
cagtctaaggtaattgaactgtatgatcttagagatagagaagtaggagatataccagct
aaaatcgacaaagcgattaatgattattctgaaaaatggacccaattagatacagttaaa
atttacagagatataatgaattttgagaccattaagaaactttcgcatggtaaaatcgaa
gacgaaaaaatctcgtatatatgtgattatacaaaagcgatgcttgacaaagacaaaata
gaaaacgaggatttagcgccgcttttgtacatacacaagtatttgtttggtttagatgat
gcaggcaaatttacccatatagtcgtcgatgaagcacaggactttagtgaatttaaattc
tatttaataaaagaaatcgtgaagggcgattctataacgatagtgggagatgttgcacaa
ggcatatactcgtatagaggaataaaatcatgggatgacttaaacaatcatgtgttaaat
ggcaaggcgacgtataagatgcttaagaaaagctatagaacgactgttgaaataatggaa
tacgccaacagtgtaattgacaaaagcaagaataaaagtatagtaaaagcagagcctatt
atgaggcacggtgatgtaccagagattgttagaataagagactatgacgaactgattcat
gatattttaaataatttgcagaatgatgagcttacgacagcgataatttgtaagacagat
gaaatgacgaaaaagatatatgaaagtttaaaaaaggatatagatgacattgcattgatt
agcgataaaacggaagtatataaaggcaggaaaatcgtgataccttcgtatttgtctaaa
ggattggaattcgatacggtgatgattcctgatgcagattcatacaatgatacagaacta
gagcttaaattgttttacgttgcaataacgagaccacttcacaaacttaaattatactac
atggaatga
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