Thermoanaerobacterium sp. RBIITD: SAMN05660242_1799
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Entry
SAMN05660242_1799 CDS
T10458
Name
(GenBank) type IV secretion system protein VirD4
Organism
thed Thermoanaerobacterium sp. RBIITD
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Ortholog
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GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
DUF87
Motif
Other DBs
NCBI-ProteinID:
SNX54166
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All DBs
Position
I:1819628..1821628
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AA seq
666 aa
AA seq
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MDFKNKVILGFIGAITYLLASVWLLMPLVKLYQLAVNLNQNVNSKVDFSVIKQMYLNPFL
DFKSLLDPIMFKGYLVALMLLTLAIVFLIIAAKNSAINDEGVKYLKDNGTHGTANWMTEG
EAKKVLGIGTNEGLILGRINGRTVTLPKKTYFNRNVAVFGAPGSMKSRSYVRTNILQLAK
EGQSIVVTDPKGELFNDMAQFLRDMGYNVKIFNLVSMIHSDRWNPVDVIQDDIDAQTFAE
VVISNTKIAGSKSGDPFWDRAEQNLLKALVLYVATEYSGRERNLASVYSLLASSDPKQID
MIFKGLPNGHPAKMPYNIYAQANDTIRTGVVIGLGTRLQVFQNRLVQRLTEESDIDLELP
GKDKCAYFCVSSDMDSTFDFLAGLFFSFLFIKLIRYADMNGGHCDPNVYFLLDEFPNIGA
IPDFTKKISTMRSRGIHSSVIFQNIAQLKNRYPNDAWQEIIGNCDTRLFLGCTDTATAEF
VSALLGQATVQSQSIRKKAGFEGMFDFGDVSISTQKRALLNPDEILRLEPMSALLILRGQ
KPFKVEKMDYTKHPLSKQIKPIPISEYNPEWVQQEGGDYSPVWDIRVKERLLKSKEKPDK
KSKTEPDIKREKETDPEQLTFYISNEPIAKEVKELDEIVKETNIEPETNHETEPKQKPKR
KKKSVW
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggattttaaaaacaaagtaatattaggctttataggtgctataacatacctgttagca
agcgtgtggcttttaatgccactagttaaactttatcaacttgcagtgaatttaaatcaa
aatgtcaattcaaaagtggatttttcagtgataaagcaaatgtatctgaatccgtttttg
gattttaaatcgctgctagatccaatcatgtttaaggggtatcttgttgcgttgatgctg
ttgactttggcgatagtatttctgataattgcagcaaaaaacagtgcaataaacgatgaa
ggtgtaaaatatctcaaagataatggtacacacggtacagcaaactggatgacagaagga
gaagcaaaaaaagtattaggcataggtacaaatgaaggcttgatattaggcagaataaat
ggcagaacagtaacgcttccaaaaaagacgtacttcaatagaaacgtagcagtattcggc
gcacctggcagcatgaaatcaaggtcatacgtaaggactaatatattgcagcttgcaaaa
gaaggacagagcatagtagtaacagatccaaaaggcgaattgtttaacgacatggcacag
tttttaagagacatgggatataacgtaaaaatattcaatcttgtaagcatgatacactct
gacagatggaatccagtagacgtgatacaggacgatatagacgcacagacatttgccgaa
gtagttatatcaaacacaaagatagcaggttcaaaatcaggagatccgttctgggatagg
gcagagcagaatcttttaaaggcacttgtattgtacgtagcaacagaatattcaggacgt
gaaagaaatctggcaagtgtctattcgcttctggcaagttcagatccaaaacagatagac
atgatctttaaaggacttcctaacgggcatccagcaaaaatgccatataacatttatgca
caggctaatgacacaatccgtacaggcgttgtaataggacttggaacaaggcttcaggtg
tttcaaaacaggcttgtacaaagacttactgaagaaagtgacatagaccttgaactgcct
ggtaaagataagtgtgcatacttctgtgtatccagtgatatggactcaacattcgacttt
ttggcaggacttttcttctcgtttttgtttataaaacttataaggtacgctgacatgaac
ggaggacattgtgatcctaacgtttatttcctgcttgatgaatttcctaatataggtgca
ataccagactttacaaaaaagataagtacaatgcgttcaagaggtatacattcaagcgta
atatttcagaacatagcacagttaaaaaacaggtatccaaatgatgcatggcaggaaatt
ataggcaactgtgacacaagactgtttttaggctgtacagatacagcaacggcagaattt
gtgtctgccttgttaggacaggcaacagtacagtcgcagtcaataagaaaaaaagcaggt
tttgaaggtatgtttgacttcggagacgtgtcaataagcacacaaaaacgtgccttgtta
aatcctgatgaaatattaaggcttgaacctatgagtgcgcttttaatactacgtggacaa
aaaccgtttaaggttgagaaaatggactatacaaaacacccgttatcaaaacagataaag
cctattccgataagtgaatacaatcctgaatgggtacagcaggaaggcggagattacagt
cccgtatgggacattagagttaaagaaaggcttttaaagagcaaagaaaaacctgataaa
aaatctaaaacagaacctgatataaaacgtgaaaaggaaacagatcctgaacaactcacc
ttctatattagtaatgaacctattgcaaaagaggtaaaagaacttgacgagatcgtaaaa
gaaacaaatatagagcctgaaacgaaccatgagacagaacctaaacaaaaacctaaaaga
aaaaagaaaagcgtgtggtag
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