Thermoanaerobacterium sp. RBIITD: SAMN05660242_1980
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Entry
SAMN05660242_1980 CDS
T10458
Name
(GenBank) Transcriptional antiterminator
Organism
thed Thermoanaerobacterium sp. RBIITD
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRD
PTS_EIIA_2
HTH_11
Mga
HTH_DeoR
PTS_IIB
HTH_Mga
HTH_10
PuR_N
GntR
SpoIIID
HTH_3
Fe_dep_repress
Sigma70_ECF
PCI
PH0730-like_N
HTH_5
HTH_20
UPF0122
Motif
Other DBs
NCBI-ProteinID:
SNX54324
UniProt:
A0A285BGG7
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Position
I:1989683..1991635
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AA seq
650 aa
AA seq
DB search
MEREFEIIKILLNSKEPIVVNKLAERLNVSNKTIRNDLKKIEHYVSRKGLKIVKKPGIGV
MIEGPENKKLDLNTELKNSLKFIEPFSPEARKNYILKRLFMCKENITIKELAEELYVSRV
TIHKDLEEVEKWLSKYNLSLIKKTNYGIEISGNEEDWRNAAASLIVANKEQNEIKELLYD
DYTGRIDYKTLIQLKELIDIDYKKLEKIVSNTESKLKFRFSDEAFISLIIHVAISIERLK
HNKDIRLSDDVLANLKQNEEYSIAEEMAKEIEEIFDVNLPDSEIGYILLHILGAKMQQNK
LQNININIENDENINMAVTMAKEIIKIAERALSIDFSNDNQLLNGLILHLKPTINRLRYG
LTLRNPILNEIKENYPDIFGVAWMTSIVFEKYLGKKVGEEELGYITLHLGAAFERAKKPL
KVLVVCTSGIGTSQLLAVRLERCFRQIEIKDIISSIALHDKNMDDIDFIISTIPIENDKP
VINITPLLTQNDIKKLENYIQNFYEDKNQKFADIEIIDFNEYISNKEKLLEAITNVLHRK
GYVKEKYLKDVLYRENVSSTYIGNGISIPHGKPDNVNKSVISFTRLKQPIKWGEENVKVV
LMICIAKNDVDKANQFFRRLYNNIDNKEFLDMILNSNNIKDIANMLMKEN
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggaaagagagtttgaaattataaagatacttttaaatagtaaagaacctatagtagta
aataagttagctgaaagattaaatgtttccaataaaaccataagaaatgatcttaaaaaa
atagaacattatgtaagcagaaaaggtttaaaaatcgtaaaaaagccaggtataggtgtg
atgattgaaggacctgaaaataaaaaattagatttaaatactgagttaaaaaatagttta
aagtttatagaacctttttcacctgaggcgagaaaaaattatatattaaaacgacttttt
atgtgcaaagaaaatataactataaaagaacttgctgaagaactttatgttagcagagta
actatacacaaagaccttgaagaagtagagaaatggctatccaaatataatttaagctta
attaaaaaaactaactatggaatagaaatatcaggtaatgaagaagactggcgtaatgct
gcagcaagtctaattgttgcgaataaagaacagaatgaaattaaagagctcttatatgat
gattatactggcagaatagattataagactttgattcagcttaaagaactgatagatatc
gattataaaaaacttgaaaagatagtttcaaatacagaatcgaaacttaaattcagattt
tctgatgaagcatttataagtcttataattcatgttgctatatctatagaaagattgaaa
cataataaggatatcagattatcagatgatgttcttgcaaatttaaagcagaacgaagaa
tattcgatagctgaagaaatggcaaaggaaattgaagaaattttcgatgttaatttaccg
gattcagaaatagggtatattttgttgcatattcttggcgcaaaaatgcaacagaataaa
ctacaaaatatcaatattaacattgaaaatgatgaaaatatcaatatggctgttactatg
gcaaaggaaataataaaaattgcggaaagggctttatcaatagatttcagcaatgacaat
caacttttaaatggattgatacttcatttaaaaccgactatcaatagactaaggtatgga
ttaactttaagaaatccaatattaaatgaaataaaagagaattatccagatatatttggg
gttgcttggatgacaagcattgtttttgaaaaatatctcggtaaaaaagtaggagaagaa
gaacttggttatataacattgcatttgggagcggcctttgagagagcaaagaaaccatta
aaagttttggttgtatgcacaagtggcattgggacttctcaacttcttgctgtgaggttg
gaaaggtgttttaggcaaattgaaataaaagatataatatcttcaattgctttgcatgat
aaaaatatggatgacatagattttataatatctactattcccatagaaaatgataaacca
gttataaatattacaccattattaactcaaaatgacataaaaaaattagaaaattatatt
caaaatttttatgaagataaaaatcaaaaatttgctgatattgaaataattgattttaat
gagtatataagcaataaagaaaagttattagaagctatcacaaatgtattgcatcgtaag
ggttatgttaaagaaaaatacttaaaagacgttttgtatagagagaatgtttcatcaaca
tatattggcaatggtatttctataccacatggaaagccagacaatgtaaataaatcagtc
atttcttttacaaggcttaaacaacctataaaatggggtgaagaaaatgtaaaagttgtt
ttaatgatatgcattgcaaaaaatgacgttgataaagcaaatcaatttttcagaagatta
tataataatattgataataaggaatttttagatatgatattaaattcaaataacataaaa
gatatagcaaatatgttaatgaaagaaaattga
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