Thermoanaerobacterium sp. RBIITD: SAMN05660242_2546
Help
Entry
SAMN05660242_2546 CDS
T10458
Name
(GenBank) UPF0042 nucleotide-binding protein
KO
K06958
RNase adapter protein RapZ
Organism
thed Thermoanaerobacterium sp. RBIITD
Brite
KEGG Orthology (KO) [BR:
thed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thed03019
]
SAMN05660242_2546
Messenger RNA biogenesis [BR:
thed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SAMN05660242_2546
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_23
AAA_22
SKI
Hen1_N
Motif
Other DBs
NCBI-ProteinID:
SNX54812
LinkDB
All DBs
Position
I:2562167..2563021
Genome browser
AA seq
284 aa
AA seq
DB search
MRFVIITGLSGAGKSQALKAMEDIGFFCIDNFPPALIPKLADLFYESKDIDKVALGMDLR
GGQLFKDIFSALDYLKKNKYDYEIIFLEASNETLIKRFKETRRKHPLSDGGSVITGINDE
RQKLIDIRRMANSIIDTTNLTAAQLKQELFNIFIEGRKFKGIIVNVMSFGFKYGIPLDAD
LVFDVRFLPNPYYIDELRLLTGNDKKVRDYVMKWEEAKQFLNKLEDMIEFLLPFYIREGK
SQLVIAIGCTGGKHRSITIANVLYELLKKRDYTVVITHRDIGEE
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
gtgagatttgttataattacaggcttatcaggtgctgggaaaagccaggcattaaaagca
atggaagatataggatttttttgcattgataattttccacctgcactaatacccaagtta
gcagacttattctatgaatcgaaagatattgataaagttgcccttggtatggatttgcgt
ggcggacagttatttaaggatattttctcagcactcgattatcttaaaaagaacaaatat
gactatgagattatatttttagaagcttcgaatgagacattgattaaaagatttaaagag
accagaagaaagcatccattgtcagacgggggttcagttataactggtataaatgatgaa
agacagaagttaatcgatataaggcgtatggcaaacagtataattgatacgacaaactta
actgctgcacagctcaaacaagaattattcaatatatttatagaaggcagaaaatttaaa
ggaattatagttaacgttatgtcatttggttttaaatatggaataccacttgatgctgat
cttgtatttgatgttagatttttaccaaatccgtattatattgatgaattaagactattg
accggcaatgataaaaaggtaagagattatgtaatgaagtgggaagaagctaagcaattt
cttaacaaattagaagatatgattgaattcttattgcccttttatataagagaggggaag
tcacagcttgtaatagctatagggtgtacaggcggtaagcataggtctataacgatagca
aatgtactttatgaattattaaaaaagagagattatactgttgttattacccatagggat
ataggtgaagagtaa
DBGET
integrated database retrieval system
