Thermoanaerobacterium sp. RBIITD: SAMN05660242_3227
Help
Entry
SAMN05660242_3227 CDS
T10458
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6)
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
thed Thermoanaerobacterium sp. RBIITD
Pathway
thed00550
Peptidoglycan biosynthesis
thed01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
thed00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SAMN05660242_3227
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
thed01002
]
SAMN05660242_3227
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thed01011
]
SAMN05660242_3227
Enzymes [BR:
thed01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SAMN05660242_3227
Peptidases and inhibitors [BR:
thed01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
SAMN05660242_3227
Peptidoglycan biosynthesis and degradation proteins [BR:
thed01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SAMN05660242_3227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Transpeptidase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
SNX55403
LinkDB
All DBs
Position
I:3199463..3200617
Genome browser
AA seq
384 aa
AA seq
DB search
MKKLVTYLLLTNFLMSPITIKAENIKVPQVAAKAAIVMDQNSGRILYEKNINEKLPMAST
TKIMTLLLALEYGNLNDIVTVSKRAASVGGSSIWLSAGEKISLSNLLYGLMLNSGNDAAT
AIAEHIGGSVENFARMMNIKAKEIGAYNTNFVTPSGLDIGIKDHYTTAYDLALITRYAFN
NYSKFAEIVSTKEKTIPWSGRDYGRYLRNKNKMLWQYEGGDGVKTGFTNKAGRCLVSSAT
RDGHRLISVVLNSGPMWDDSQNILDYSFAKYKPLNIIKKGQIVKTIIVQNGKSKYLPLLY
NDDFTLPVSDDEVLNIKVNIDIPRIKKAPVGIGEKIGRASIVLNGSVMGSIDIVSGKTID
EKDYKYNLETIIKNWLNLFQYENS
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagctagtaacgtatttacttttaactaatttccttatgtcccctataaccatt
aaagctgaaaacataaaggtaccacaagttgcggcaaaagctgcgattgtcatggatcaa
aattctggtagaattttatacgaaaaaaatattaacgaaaaattgccaatggctagtact
acaaaaattatgacactgcttttggcactggaatacggaaatttaaatgatattgttaca
gtaagcaaaagagctgcaagtgtaggaggttcgtcaatatggctttcagcaggtgaaaag
atatctttgtcgaatcttttatatgggctaatgcttaattcgggaaatgatgcagcaacg
gcgatagcagaacatataggtggtagtgtagaaaatttcgctcggatgatgaacattaaa
gctaaagaaataggtgcatacaatacaaattttgttacaccatctggtcttgatataggc
ataaaagaccattacacaactgcttacgatttagcacttattacaaggtatgctttcaat
aattacagtaaatttgctgaaattgtttcgacaaaagaaaaaacaataccttggagtgga
cgcgattatgggcgatatttgagaaataaaaataagatgctctggcaatatgaaggcgga
gatggagttaaaacaggatttactaataaggctggaagatgccttgtttcatcagcaaca
agagatgggcatagattaatttctgtagttctcaatagtggccctatgtgggatgattca
caaaatattcttgattattcttttgcaaaatataaacctttaaacataattaaaaagggc
caaatagttaaaactataattgttcaaaatggtaaaagcaaatatctaccattgctttat
aatgatgattttacattgcctgtttcagatgatgaagtactaaatattaaagttaatatc
gatataccgagaataaaaaaagctcctgtaggcataggagaaaaaattggtagggcaagt
atagttttaaatggcagcgtcatgggttccatagatatagtttctggtaaaacaattgat
gaaaaagattataagtataaccttgaaacaataattaaaaattggttaaatttatttcaa
tatgaaaactcttag
DBGET
integrated database retrieval system
