Thermoanaerobacterium sp. RBIITD: SAMN05660242_3262
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Entry
SAMN05660242_3262 CDS
T10458
Name
(GenBank) host factor-I protein
KO
K03666
host factor-I protein
Organism
thed Thermoanaerobacterium sp. RBIITD
Pathway
thed02024
Quorum sensing
thed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMN05660242_3262
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAMN05660242_3262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thed03019
]
SAMN05660242_3262
03036 Chromosome and associated proteins [BR:
thed03036
]
SAMN05660242_3262
Messenger RNA biogenesis [BR:
thed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SAMN05660242_3262
Chromosome and associated proteins [BR:
thed03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
SAMN05660242_3262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
SNX55436
LinkDB
All DBs
Position
I:3231185..3231439
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AA seq
84 aa
AA seq
DB search
MNQKAAINLQDIFLNQVRKEHIAVTVYLINGFQLKGMVKGFDNFTVVLETDNKQQQLIYK
HAVSTITPLKPVIFTTTEKDEKQQ
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaaagcagctatcaatttacaagatatatttttaaaccaggttagaaaggaa
catatagcagtaacagtatacttgattaacggttttcagttaaaaggaatggttaaaggt
tttgataattttaccgttgttttagagacagataataaacagcagcaacttatctataaa
catgctgtttctacaataactcctttaaaacctgtaatatttacgacaacagaaaaagat
gaaaagcaacagtaa
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