KEGG   Thermoanaerobacterium sp. RBIITD: SAMN05660242_3262
Entry
SAMN05660242_3262 CDS       T10458                                 
Name
(GenBank) host factor-I protein
  KO
K03666  host factor-I protein
Organism
thed  Thermoanaerobacterium sp. RBIITD
Pathway
thed02024  Quorum sensing
thed03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:thed00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SAMN05660242_3262
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SAMN05660242_3262
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thed03019]
    SAMN05660242_3262
   03036 Chromosome and associated proteins [BR:thed03036]
    SAMN05660242_3262
Messenger RNA biogenesis [BR:thed03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     SAMN05660242_3262
Chromosome and associated proteins [BR:thed03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    SAMN05660242_3262
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: SNX55436
LinkDB
Position
I:3231185..3231439
AA seq 84 aa
MNQKAAINLQDIFLNQVRKEHIAVTVYLINGFQLKGMVKGFDNFTVVLETDNKQQQLIYK
HAVSTITPLKPVIFTTTEKDEKQQ
NT seq 255 nt   +upstreamnt  +downstreamnt
atgaatcaaaaagcagctatcaatttacaagatatatttttaaaccaggttagaaaggaa
catatagcagtaacagtatacttgattaacggttttcagttaaaaggaatggttaaaggt
tttgataattttaccgttgttttagagacagataataaacagcagcaacttatctataaa
catgctgtttctacaataactcctttaaaacctgtaatatttacgacaacagaaaaagat
gaaaagcaacagtaa

DBGET integrated database retrieval system