Thermoanaerobacterium sp. RBIITD: SAMN05660242_3275
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Entry
SAMN05660242_3275 CDS
T10458
Name
(GenBank) ribonucrease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
thed Thermoanaerobacterium sp. RBIITD
Pathway
thed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMN05660242_3275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thed03019
]
SAMN05660242_3275
Messenger RNA biogenesis [BR:
thed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SAMN05660242_3275
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
RIC3
Bacillus_HBL
KH_2
DUF3149
Motif
Other DBs
NCBI-ProteinID:
SNX55449
UniProt:
A0A285BJN3
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All DBs
Position
I:complement(3242891..3244441)
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AA seq
516 aa
AA seq
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MNNISPLILAIIVLIAVAIGLFIGYFIRKFIAESKIKSAEELSHTILENAKKDGENKKRE
LLLEAKEEIHKQRTELEKEVRDRRGELQRLERRLIQREESLDRRAETLEQKDALIERKQK
EINDLEEEIKSMHQKEVEELERISELTRDEARNILLNDVKNEISHEAALMIKDIEAKAKE
EAERRAREIIATSIQRCAADHAAETTVSVVALPNDEMKGRIIGREGRNIRTLETLTGIDL
IIDDTPEAVVISGFDPIRREVARIALEKLIEDGRIHPARIEEMVEKAKKEVDNVIVKAGE
EATFETGVHGLHPEIIKLLGRLKFRTSYGQNVLKHSIEVAHLAGLMAYELGADANIAKRA
GLLHDLGKAVDHEVEGPHVMIGAELAKRYHESNDVIHAIMAHHNDVEPQTVEAVLVQSAD
AISAARPGARRETLESYLKRLDKLEEIANSFDGVEKSYAIQAGREIRIMVKPEVVNDEST
VLLARDIKKKIEEELEYPGQIKVIVVRETVAVDYAK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
attaacaacattagtccattaattttagctataattgtattaattgctgtagcaattggt
ctttttattggatattttatacgaaaatttatagcagaatccaaaataaaaagtgcagaa
gaattatcacatactattttggaaaatgccaaaaaagatggtgaaaataaaaagagagag
ttgctgctggaagcaaaggaagaaattcacaaacagagaacagagctagaaaaggaagta
agagatcgcagaggagaactgcaaagattagaaaggcgtttaatacaaagggaagaatct
cttgataggagagcagaaacgttagagcaaaaagatgctttgattgaaagaaagcaaaag
gaaattaatgatttagaagaagaaataaagtcgatgcatcaaaaggaagttgaagaatta
gaaagaatatcagaattaacgagagatgaagcacgaaacattttgttaaacgatgttaaa
aatgaaatatcccatgaagctgctttaatgataaaggatatagaagcaaaagctaaggaa
gaagcggagagacgtgcaagagaaataatagctacatctattcagagatgtgcagctgac
catgcggctgaaactaccgtttctgttgtcgcattaccaaatgatgaaatgaagggtagg
attataggacgtgaaggcagaaatattagaacccttgaaacacttaccggtattgattta
attattgacgatacaccggaagctgtcgtaatctcagggtttgacccgataagaagagaa
gttgcaagaatagctttagaaaaattaatagaagacggaaggatacatccagcaagaatt
gaagagatggtagaaaaggctaaaaaagaagtcgataatgtaattgtaaaggctggcgaa
gaagcgacatttgagacaggtgtgcatggtttgcatcctgagataattaaattgcttggt
agacttaagtttagaacaagttatggtcaaaatgtattaaaacattctatagaagtagca
catttagctggacttatggcatatgaacttggtgcagatgctaatatagcaaaaagggct
ggtttactgcatgaccttggtaaagctgtcgaccatgaggtagaaggaccccatgttatg
ataggtgcagagttagcaaagagatatcacgaatctaatgatgttatacatgctataatg
gcacatcataatgatgttgaaccacagaccgttgaggcagtattggtgcaatctgcagat
gcaatatctgcggcaagacctggtgcaaggcgtgaaacacttgaatcatatttaaagcgt
cttgataaattagaagaaattgcaaattcctttgatggagtcgaaaaatcatatgcgata
caggccgggcgtgaaatcagaataatggtaaagccagaagttgttaatgatgaatcgacg
gttttattagcccgtgatattaaaaagaaaattgaagaagagttagaataccctggacaa
ataaaagttatagttgttagagaaactgttgctgttgactatgcaaaatga
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