Thermoanaerobacterium sp. RBIITD: SAMN05660242_3294
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Entry
SAMN05660242_3294 CDS
T10458
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
thed Thermoanaerobacterium sp. RBIITD
Pathway
thed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMN05660242_3294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thed03019
]
SAMN05660242_3294
03016 Transfer RNA biogenesis [BR:
thed03016
]
SAMN05660242_3294
Enzymes [BR:
thed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SAMN05660242_3294
Messenger RNA biogenesis [BR:
thed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SAMN05660242_3294
Transfer RNA biogenesis [BR:
thed03016
]
Prokaryotic type
tRNA degradation factors
SAMN05660242_3294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
KH-I_KHDC4-BBP
MUG2_C
Par3_HAL_N_term
Amidoligase_2
OB_RRP5_4th
SPATA25
Motif
Other DBs
NCBI-ProteinID:
SNX55468
UniProt:
A0A285BKP9
LinkDB
All DBs
Position
I:complement(3264059..3266155)
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AA seq
698 aa
AA seq
DB search
MERVFEMDLAGRKLTVQTGKLAQLANGSALVRYGDTVVLVTACASKEPREGVDFFPLSVD
YEERLYSVGKIPGGFIKREGKPTEKAILTSRLIDRPIRPLFPHGYRNDVQVIATVLSVDP
EVQPEIVAMIGSSIALSISDIPFNGPTGSVSVAFVDGKFIINPDLKTREKSSLHLTVSGT
KDAIMMVEAGANEIPEEVMLDAIMYAHEYIKKIVEFIEGIVKEVGVPKSEVILHEIDGDL
ENLVREYATEKIYNALRTEEKKERNDNIDKVEEEVLEHFKDEYPDNLADIDEVLYTITKE
QMRKMITDEKIRVDGRGLDDIRPITCDVGILPRTHGSAVFTRGQTQVLTVATLGPLGDIQ
ILDGLGDEESKRYMHHYNFPPFSVGETRPLRGPGRREIGHGALAERALEPMIPSEEEFPY
TIRLVSEVLSSNGSTSQASVCGSTLALMDAGVPIKSPVAGVAMGLIKEGDSVSVLTDIQG
IEDFLGDMDFKVAGTERGITAIQMDIKIAGIGREILSTALEKARKGRLFILNKMLETIKE
PKKELSPYAPRIIRLNVDPDKIRDIIGAGGKTINKIIADTGVKIDIEDDGRVFISSVDLK
AGEKAKMMIEAITKDVEAGAIYLGKVTRIVSFGAFVEIAPGKEGLVHISKLAKKHVNKVE
DVVKVGDEILVKVTEIDKQGRIKLSRKDALPEENEKEE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggaaagagtatttgaaatggatcttgcgggcagaaaattaacagttcaaacaggaaaa
cttgcacaattagcaaatggtagtgcacttgtcaggtatggtgataccgttgtgttagtt
acagcctgtgcctcaaaagagccaagggaaggtgttgatttctttcctttaagtgtagat
tatgaagaaagattatactctgtaggtaaaatacctggtggttttataaaaagagaggga
aaaccgacagagaaagctatactaacttctagactaatagatagaccgataagaccatta
ttcccacatggatacagaaatgatgttcaagttatagcaacagttttgtcagttgatcca
gaagttcaacctgaaatagtagctatgattggttcgtctattgcattatctatatctgat
ataccttttaatgggccgacagggtctgtatctgtcgcatttgtagatgggaaatttata
ataaatcctgatcttaaaactagagaaaaaagttcacttcacttaaccgtctctggtaca
aaagatgcgataatgatggttgaagctggtgcaaatgaaataccagaagaagtgatgtta
gatgctattatgtatgcacatgagtacataaaaaaaatagtagaatttatcgaaggaata
gttaaagaagtgggagtaccaaaatccgaagttattttacatgaaatagatggtgatctt
gaaaatcttgtcagagaatatgcaacagaaaagatatacaatgcgttaagaactgaggaa
aagaaagaaagaaatgataatatcgataaagtagaagaagaggttttggagcattttaaa
gacgagtatccagataatcttgcagatatagacgaagttttatatactataacaaaagaa
caaatgagaaagatgattacagacgaaaaaattagagttgatggaagaggacttgatgat
attagaccaataacttgtgatgtaggtattcttccaagaacacatggctctgcagttttt
acgcgtggacaaacacaggttttgactgttgctacattaggtccactcggagatatacag
atactggatgggctaggtgatgaagagtcaaaaaggtatatgcaccactataatttccct
ccatttagtgttggcgaaacaagaccattaagaggaccggggagaagagaaatcgggcat
ggtgcacttgcagaaagggcattagaaccgatgattccatcagaagaagaattcccttat
actataagacttgtttctgaagtattaagttcaaacggctcaacatctcaagctagtgta
tgtggtagtactttagcactgatggatgctggtgtacccattaaatcacctgttgcagga
gtagcaatgggacttataaaagaaggagattctgtttcagtgcttacagatattcaaggt
atagaagactttcttggtgatatggactttaaagtagccggtactgaaaggggcataaca
gctatacaaatggatataaagatagctggtataggtcgagagattctatcaacggcgtta
gaaaaggcaagaaagggtaggctttttatactaaataaaatgttagaaaccattaaagaa
ccaaagaaagagctttcaccatatgctccaaggataataagattaaatgtagatccagat
aaaattagagatatcattggtgctggcggtaaaacaatcaataaaataattgctgatact
ggtgttaaaatagatattgaagatgatgggcgagtatttatctcctcagtagacttaaaa
gccggtgaaaaagcaaaaatgatgattgaggcaattacaaaggatgtcgaagctggagct
atatacctcggaaaagttactagaattgtttcatttggtgcattcgttgaaattgctcca
ggtaaagaaggccttgtgcatatttcaaagcttgctaaaaaacatgttaataaagtcgag
gatgtagtaaaagttggtgacgaaattttagtaaaagtaacagaaatagataaacaagga
cgaataaaattatcaagaaaagatgctttacctgaagaaaacgaaaaagaagaataa
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