Thermoanaerobacterium sp. RBIITD: SAMN05660242_3319
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Entry
SAMN05660242_3319 CDS
T10458
Name
(GenBank) RNA polymerase sigma factor for flagellar operon FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
thed Thermoanaerobacterium sp. RBIITD
Pathway
thed02020
Two-component system
thed02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
thed00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SAMN05660242_3319
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SAMN05660242_3319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thed03021
]
SAMN05660242_3319
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
thed02035
]
SAMN05660242_3319
Transcription machinery [BR:
thed03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SAMN05660242_3319
Bacterial motility proteins [BR:
thed02035
]
Flagellar system
Flagellar assembly proteins
Stator
SAMN05660242_3319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_10
HTH_Mga
MOZ_SAS
HTH_28
HTH_23
KORA
DksA-like_N
ABC_tran_CTD
FakA-like_C
Osmo_CC
UPF0122
Motif
Other DBs
NCBI-ProteinID:
SNX55493
LinkDB
All DBs
Position
I:complement(3288526..3289266)
Genome browser
AA seq
246 aa
AA seq
DB search
MSILEQDLWVKYTKFRDDSVKNDIIVKYMPLVKHIVKRICISDVSKEDIDDLVSQGMIGL
IDAVNRYDITKGVKFETYASIRIKGEIIDYLRKKDWIPRSLKKRYKNIEKTIETLEQEFK
REPSIDEIMAATGISKNDVLKTLSYMNAGYISSLDEVIENNLKISSVSDVEIINPEDEVL
SSDLKNNIAKAIDMLQEKERLIVTLYYFEDLNYKEISKILGLTESRISQIHSKAIKKLRE
RLTDFV
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattctcgaacaagatttatgggttaaatatacaaaatttagagatgatagtgtt
aaaaacgatataatagtaaaatatatgcctcttgttaaacatatagttaaaagaatatgt
atttcagatgtaagtaaggaagatattgatgacctagtgagccaaggaatgataggactt
attgatgccgttaatagatatgacataacgaagggtgtaaaatttgaaacatatgcatca
attagaataaaaggagaaataatcgattatctaagaaaaaaggattggattccgagaagc
ttaaagaaaagatataagaatattgaaaagactattgaaacattggaacaagaatttaag
agagaaccatctatcgatgaaataatggctgctaccggtatatcaaagaacgatgtatta
aaaactcttagttatatgaatgctgggtatataagttctcttgacgaagttatcgagaat
aatttaaagatttcatctgtatctgatgttgagataataaatccagaagatgaggttttg
tcatctgacttaaagaataatattgccaaagctatagacatgttgcaagaaaaagaaaga
cttattgtcacactttattattttgaagatttgaattataaggagataagcaaaattctt
ggattaacagaatcacgaatatcacaaatacattccaaggcaataaaaaaattaagagaa
aggttaacagattttgtttaa
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