Thermoanaerobacterium sp. RBIITD: SAMN05660242_3356
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Entry
SAMN05660242_3356 CDS
T10458
Name
(GenBank) DNA topoisomerase-1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
thed Thermoanaerobacterium sp. RBIITD
Brite
KEGG Orthology (KO) [BR:
thed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thed03032
]
SAMN05660242_3356
03400 DNA repair and recombination proteins [BR:
thed03400
]
SAMN05660242_3356
Enzymes [BR:
thed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SAMN05660242_3356
DNA replication proteins [BR:
thed03032
]
Prokaryotic type
DNA Topoisomerases
SAMN05660242_3356
DNA repair and recombination proteins [BR:
thed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SAMN05660242_3356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Zn_ribbon_RPB9
Zn_ribbon_IS1595
DNA_ligase_ZBD
DUF7351
Motif
Other DBs
NCBI-ProteinID:
SNX55530
UniProt:
A0A285BKC2
LinkDB
All DBs
Position
I:complement(3318587..3320647)
Genome browser
AA seq
686 aa
AA seq
DB search
MAKSLVIVESPSKAKTILKFLGKNYKVEASMGHVRDLPKSQLGIDIEKNFEPKYITIRGK
GPIIEKLKKEAKSAARVFLATDPDREGEAISWHLANLLNINVDDTCRIEFHEITKNAIQN
AIKNPRKIDMNLVDAQQARRILDRLVGYNISPLLWRKIKRGLSAGRVQSVATRLICDREK
EIENFKPEEYWTISAFLYEKNKAQFFEAKFYGTKNNKIELKNENEVNNIIDNLDENYIVD
SVKTGVKKRNPAPPFITSTMQQEASRKLGFTAKKTMMIAQQLYEGVDIKGEGSLGLITYI
RTDSTRVSDEAKKAAYEYILEKYGKEYANPDAVYTKKKGNVQDAHEAIRPTYINIEPEKI
KDSLKTDQYKLYKLIWSRFISSQMSQAIYDTINMDILNSNYIFKASGSKLKFSGFMSVYT
EGTDNENLEEKTLPLLKEGEHLKLKELKPEQHFTQPPSRYTEATLIKELEEKGIGRPSTY
APIISTLLDRGYVIKEKKNLKPTELGFIVTDVMKEFFSKIVDVKFTAEMEEQLDEVEEGI
KKWCDVIDGFYNEFYGSLKIAEEQMKDIEIKDEETDIKCEYCGRNMVIKYGRYGKFLACP
GFPECKNTKPLYEETGVLCPKCGGKILARKSKKGKNYFVCENSPKCDTILWDKPVNEKCP
KCGSLLVEKYSKKGKIIKCSSCDFVK
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcattagtgatagttgaatcaccctcaaaggcaaaaactatacttaagttt
ttgggtaaaaactataaggttgaagcctccatggggcatgtaagagatctgcctaagagc
caacttggtatagatatcgaaaaaaattttgagcctaaatacataactatccgcggaaaa
ggcccaattatagaaaaattgaaaaaagaggcaaagtctgctgcaagagtttttttagca
acagaccctgatagagagggtgaagcaatatcatggcatcttgcaaatttacttaatata
aatgttgatgatacttgcagaattgaatttcatgagataacgaaaaatgcaatacaaaat
gccattaaaaatcctcgtaaaatagatatgaaccttgtagatgcacaacaggctagaaga
atattagatagattagtaggatataatataagccctttgctctggagaaagattaaaagg
ggtttaagtgctggaagagtacagtctgttgcaacgaggcttatatgcgatagagaaaaa
gaaattgaaaattttaaaccggaagaatattggacgatttctgcatttttgtatgaaaaa
aataaggcacagttttttgaggcaaaattttatggaacaaagaataataaaatagagcta
aaaaatgaaaatgaagtaaataacattatagataatttggacgaaaattatatagttgac
agcgttaaaacaggtgtaaaaaaaagaaatcctgctccaccttttataacaagcacaatg
cagcaggaagcatcgagaaagctcggttttactgctaaaaaaacaatgatgatagcgcaa
caattatacgaaggtgttgatataaaaggagaaggtagcctcggattaattacttatatt
agaacggactctacaagggtatctgatgaagcaaaaaaagcagcttatgaatatatatta
gaaaagtatggaaaagaatatgcaaatcctgatgcagtatatacaaagaagaagggaaat
gttcaggatgctcacgaagccatcaggcccacatacattaatattgaaccggaaaaaata
aaagattcattgaaaacagatcagtataaactttacaagcttatatggagcaggtttatt
tcaagtcagatgtcacaggctatttatgatacaattaacatggatatactaaatagtaat
tatatatttaaggcatcaggatcaaaattgaagttttctggatttatgagtgtatataca
gaaggaacagacaatgaaaatttggaagaaaaaacgcttcccttattaaaagaaggggaa
catttaaagctaaaggaattaaaacctgaacaacattttacacaaccgccttcaaggtat
acggaggcaactttgataaaagaactcgaagaaaaaggtattggcaggccaagtacttat
gcacctataatatcaacattacttgatagaggatacgtcattaaggagaagaaaaactta
aaacctacagagcttggatttattgttacagatgtaatgaaagagtttttctcaaaaatt
gtcgatgttaagtttactgctgaaatggaagaacagcttgatgaagttgaagaaggaata
aaaaagtggtgtgatgttattgatggattttataacgaattttatgggtcattaaaaatc
gctgaagaacaaatgaaagatattgaaataaaggatgaagaaacagatataaaatgtgaa
tattgtggcaggaatatggttataaaatatggtagatatggcaaatttttagcatgtcca
ggttttcctgaatgtaaaaatactaagccattgtatgaagaaacaggtgtattatgtcct
aaatgcggtgggaaaatattagcaaggaagagtaagaaaggaaaaaactattttgtttgc
gagaattcacctaagtgtgatactatattatgggataaacctgttaatgaaaagtgtccc
aaatgtggcagtctccttgtagagaaatatagcaagaaaggtaaaattataaaatgcagt
agttgcgattttgtaaagtaa
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