Thermaerobacter sp. FW80: E1B22_03270
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Entry
E1B22_03270 CDS
T05930
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
thef
Thermaerobacter sp. FW80
Pathway
thef03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
thef00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E1B22_03270 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thef03021
]
E1B22_03270 (rpoC)
03400 DNA repair and recombination proteins [BR:
thef03400
]
E1B22_03270 (rpoC)
Enzymes [BR:
thef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E1B22_03270 (rpoC)
Transcription machinery [BR:
thef03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E1B22_03270 (rpoC)
DNA repair and recombination proteins [BR:
thef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E1B22_03270 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
QBS37039
UniProt:
A0A4P7GS34
LinkDB
All DBs
Position
complement(766909..770772)
Genome browser
AA seq
1287 aa
AA seq
DB search
MKTIESFQDRIGEGLVQDVNHFDAIRISLASPEKIREWSKGEVKKPETINYRTLKPERDG
LFCERIFGPTKDWECHCGKYKRVRYKGIICDRCGVEVTQSKVRRERMGHIELAAPVCHIW
YFKGIPSRLGLLLDMSPRALERVLYFAAYVVIDPGETALLEKQLLTETEYREAREKYGNA
FRAGMGAEAIKELLERLDLDELAEELRAEIKNSSGQRRLRAVRRLEVVEAFRKSGNDPTW
MILEAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVRNEK
RMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIV
VGPRLKMHQCGLPKEMALELFKPFVMKRLVQLGYAHNIKSAKRMVERVRDEVWDVLEEVI
KEHPVLLNRAPTLHRLGIQAFEPVLVEGRAIQIHPLVCTAYNADFDGDQMAVHVPLSAEA
QAEARILMMSVHNLLNPKDGKPVVTPTQDMVLGCFYLTLEREGAKGEGRIFSSADEVLMA
YQLKQVEVHARIKARVQTAEGRRLIETTVGRVIFNEALPVELRFINEPVDKKKLGDIVAE
SFRRLGYAKTVEMLDAIKELGFHFATQAGTSIAIGDVKIPEKKAEYIAEAEAQVEQVESQ
YRRGLISAEERYQKIIDIWNKTKDKVTQELTRVLDHFNPVYMMAISGARGNLTQIAQLGG
MRGLMTDPSGRIIEQPVRSNFREGLTVLEYFTSTHGARKGLADTALRTADSGYLTRRLVD
VSQDVIVREEDCGTTEGITVSEIRDGEEVIESLQDRIVGRIAVRDIVHPETGEVIVPAGE
EIDEDRAQAIVDAGIQSVEIRSVLACRSRHGVCARCYGRDLATGKMVSIGEAVGTIAAQS
IGEPGTQLTMRTFHTGGVAGEDITQGLPRVEELFEARKPKGQAVMTEVGGTVKVVETKQR
REVRVIADDGSWQAYTVPFGARLLVRDGDRVEPGDVLTEGPINPHDILKIKGVQAVQLYL
LQEVQKVYHMQGVDINDKHIEIIIRQMMRKVKVEDAGDTDLLPGGLVDVFEFEEANAQLP
EGARPAVARPVLLGITKAALATESFLSAASFQETTRVLTEAAIKGKTDPLLGLKENVIIG
KLIPAGTGMSRYRRMQILVEGKSEREVMAQVRRAETLAARALGEDGAAAPADGVAVDGAV
NGPVVPQSLAAGGDGAALLDEAAGAAAGTDGAGTGGADAPDGEGQDGAVPGGDGAAPAAD
GAASGAAGDGVADEPASAAEDDAERSP
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaccatcgagagcttccaggaccgcatcggggagggccttgtccaggacgtcaac
cacttcgacgccatccgcatcagcctggcgtcgcccgagaagatccgcgagtggtccaag
ggcgaggtgaagaagcccgagaccatcaactaccggaccctcaagcccgagcgggatggc
ctcttctgcgagcgcatcttcggaccgaccaaggactgggagtgccactgcggcaagtac
aagcgggtccgctacaagggcatcatctgcgaccgctgcggcgtcgaggtcacccagtcc
aaggtgcggcgcgagcgcatgggccacatcgagctggccgcgcccgtctgccacatctgg
tacttcaagggcatcccgtcgcgcctcggcctgctgctggacatgtcgccccgggcgctg
gagcgcgtgctgtacttcgccgcctacgtggtcatcgatcccggtgagacggcgctgctg
gagaagcagctgctcacggagaccgagtatcgcgaggcgcgggagaagtacggcaacgcc
ttccgggcgggcatgggcgccgaggcgatcaaggagctgctggagcgcctcgacctggac
gaactggccgaggagctgcgcgcggagatcaagaactccagcggtcagcggcggctgcgg
gccgtgcgccggctggaggtggtggaggcgttccgcaagtcgggcaacgacccgacgtgg
atgatcctggaggccatcccggtcatcccgcccgacctgcgaccgatggtgcagctggac
ggcggccgcttcgccacgtccgacctcaacgacctctaccggcgcgtgatcaaccggaac
aaccggctcaagcggctgctggacctgggtgcgccggacatcatcgtgcgcaacgagaag
cgcatgctccaggaggccgtcgacgccctgatcgacaacggccgccgcgggcggccggtg
accggccccggcaaccggccgctgaagtcgctctcggacatgctcaagggcaagcagggg
cggttccgccagaatctcctgggcaagcgggtcgactactccggccgctcggtgatcgtc
gtcggcccgcggctgaagatgcaccagtgcgggctgcccaaggagatggccctggagctg
ttcaagcccttcgtcatgaagcggctggtgcagctgggctacgcccacaacatcaagagc
gccaagcgcatggtggagcgggtgcgggacgaggtctgggacgtgctggaggaggtcatc
aaggagcacccggtgctgctcaaccgggcgcccacgctgcaccgcctgggcatccaggcc
ttcgagcccgtgctggtggagggccgcgccatccagatccacccgctggtgtgcacggcg
tacaacgccgacttcgacggcgaccagatggccgtgcacgtgcccctgtcggcggaggcc
caggccgaggcgcgcatcctgatgatgtcggtccacaacctcctgaaccccaaggacggc
aagcccgtggtgacgcccacccaggacatggtgctgggctgcttctacctgaccctggag
cgggagggcgccaagggcgagggccgcatcttcagctccgccgacgaggtgctgatggcc
taccagctcaagcaggtggaggtccacgcgcggatcaaggcgcgggtccagaccgcggag
ggccgcaggctgatcgagaccaccgtcggccgggtgatcttcaacgaggcgctgccggtg
gagctgcggttcatcaacgagccggtcgacaagaagaagctgggcgacatcgtggccgag
agcttccggcgcctggggtacgccaagacggtggagatgctggacgccatcaaggagctg
ggcttccacttcgccacccaggccggcaccagcatcgccatcggcgacgtcaagatcccc
gagaagaaggcggagtacatcgccgaggcggaggcccaggtggagcaggtggagagccag
taccgccggggtctcatcagcgcggaggagcggtaccagaagatcatcgacatctggaac
aagacgaaggacaaggtgacccaggagctgacccgggtgctggaccacttcaacccggtg
tacatgatggcgatctccggcgcccgcggaaacctcacccagatcgcccagctggggggc
atgcgcggcctgatgaccgacccgtcgggccggatcatcgagcagccggtgcggtccaac
ttccgcgaggggctgacggtgctggagtacttcacctccacccacggggcgcgcaagggg
ttggccgacacggcgctgcgcacggccgactccggttacctgacccggcggctggtggac
gtctcccaggacgtcatcgtccgcgaggaggactgcggcaccaccgagggcatcactgtc
tcggagatccgcgacggcgaggaggtcatcgagtccctgcaggatcgtatcgtcggccgc
atcgccgtccgggacatcgtgcaccccgagacgggcgaggtcatcgtgccggcgggcgag
gagatcgacgaggaccgcgcccaggccatcgtcgacgccggcatccagtcggtggagatc
cggtcggtgctggcctgccggtcccggcacggggtgtgcgcgcggtgctacggccgcgac
ctggcgacgggcaagatggtcagcatcggtgaggccgtgggcaccatcgccgcccagtcc
atcggcgagccggggacgcagctgaccatgcgcaccttccacaccggcggcgtcgccggc
gaggacatcacccagggtctgccccgggtcgaggagctgttcgaggcccgcaagcccaag
gggcaggcggtgatgaccgaggtgggcggcacggtcaaggtggtcgagaccaagcagcgc
cgggaggtgcgggtcatcgccgacgacgggtcgtggcaggcctacaccgtgcccttcggc
gcgcgcctgctggtgcgggacggcgaccgggtcgaacccggcgacgtgctgacggagggg
cccatcaacccccacgacatcctgaagatcaagggcgtccaggccgtccagctgtacctg
ctgcaggaggtccagaaggtctaccacatgcagggcgtggacatcaacgacaagcacatc
gagatcatcatccgccagatgatgcggaaggtgaaggtggaggacgcgggcgacaccgac
ctgttgcccggcggcctggtggacgtgttcgagttcgaggaggccaacgcccagctgccc
gagggggcgcggcccgcggtagcgcggccggtgttgctgggcatcaccaaggcggccctg
gccaccgagtcgttcctgtcggcggcctccttccaggagaccacccgggtcctgacggag
gcggccatcaagggcaagaccgacccgctcctcgggctcaaggagaacgtgatcatcggc
aagctgatccccgccggcaccggcatgagccgctaccgccgcatgcagatcctggtggag
ggcaagtcggagcgggaggtcatggcccaggtgcgccgcgccgagacgctggccgcccgc
gccctgggtgaggatggtgcggcggccccggccgacggcgtggcggtggatggggcggtc
aacggtcccgtggtcccccagagcctggcggcgggtggtgacggcgccgcgctgctggac
gaggccgcgggcgcggcggcgggcaccgacggcgccgggaccggcggcgcggacgcgccg
gacggcgagggccaggacggcgccgtgccgggcggcgacggcgcggccccggcggccgat
ggcgcggcctccggcgcggccggggatggagtcgcggacgaaccggccagcgcggcggag
gacgacgccgagcggtctccgtga
DBGET
integrated database retrieval system
