Thermaerobacter sp. FW80: E1B22_08800
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Entry
E1B22_08800 CDS
T05930
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
thef
Thermaerobacter sp. FW80
Pathway
thef03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thef00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E1B22_08800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thef03019
]
E1B22_08800
03016 Transfer RNA biogenesis [BR:
thef03016
]
E1B22_08800
Enzymes [BR:
thef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
E1B22_08800
Messenger RNA biogenesis [BR:
thef03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E1B22_08800
Transfer RNA biogenesis [BR:
thef03016
]
Prokaryotic type
tRNA degradation factors
E1B22_08800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
Carbam_trans_C
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
QBS37849
LinkDB
All DBs
Position
2116257..2118506
Genome browser
AA seq
749 aa
AA seq
DB search
MESHATEVKKVFRTELAGRPLVVEIGQLAQQANGSALVRYGDTVILATATASKEPRQGID
FFPPRVDWEERLYAAGRIPGSFFRREGKPSERAILSGRLTDRPLRPLFPKGYRNEVQIIV
TTLSYDDDCSPEIAGIIGASVALGISDIPWNGPVGAVEVGLLDGELVINPTAAQREHSRL
DLTVAGTRDAINMVEAGAHQVPEATILDAIFRGHEEIQRLVAFQEAIIAQCGKPKAQPPL
YEPDPAIAVAVRTRYAERLRAAINHPDKQAREQAVEEVKKAALEELLAEFPEGEMDIKHV
LDDVLKEIVRRQILEEGIRPDGRRPDEIRPIHVEVGLLPRAHGSGLFQRGQTQVLTVASL
GAPGDRQMLDTLGQIEEFKRYMHHYNFPPYSTGEVAPLRAPSRREIGHGALAERALVPVL
PDELEFPYTIRLVSEVLSSNGSTSMASTCGSTLALMDAGVPIKAPVAGVAMGLIKEGDRF
VVLTDIQGIEDQLGDMDFKVAGTREGVTAIQMDIKIAGVDRAVLEKALEQARVGRLHILE
KMLAVIDKPRPELSPYAPRIIIMQIPVEKIREVIGPGGRIVNRIADECGVKIDIEDDGKV
YISAQTQQGGQKAKEWIEQIVADVEVGSVYLGKVTRLMSFGAFVEILPGKEGLVHVSRLA
PQRVPRVEDMVRPGDTVLVKVVEIDDLGRVNLSRKDALAEQPEKRHMEQLSGPRAHDFDQ
PVPVGGGRRGAAGHNGRPGGPGPRGRRRR
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggagagccacgcaacggaggtcaagaaggtcttccgcaccgagctggccggccgcccg
ctggtggtggagatcgggcagctggcccagcaggccaacggcagcgccctggtgcgctac
ggcgatacggtgatcctggccacggcgacggcctccaaggagccgcgccagggcatcgac
ttcttcccgccgcgggtggactgggaggagcggctgtacgcggccggacgcatcccgggc
tccttcttccgccgcgagggcaagcccagcgagcgcgccatcctctcggggcggctgacg
gaccggccgctgcggcccctgttccccaaggggtaccgcaacgaggtgcagatcatcgtc
accaccctgtcctacgacgacgactgctcgccggagatcgccggcatcatcggcgcgtcg
gtggcgctgggcatctccgacatcccctggaacggccccgtgggggccgtggaggtcggg
ctgctggacggggagctggtgatcaatcccaccgccgcccagcgggagcacagccggctg
gacctgacggtggccgggacccgggacgccatcaacatggtggaggccggcgcccaccag
gtgccggaggccaccatcctcgacgccatcttccgcggccacgaggagatccagcgcctg
gtggcgttccaggaggccatcatcgcccagtgcggcaagcccaaggcgcagccgccgctc
tacgagcccgatccggccatcgccgtggcggtgcgcacgcggtacgccgagcgcctgcgg
gcggccatcaaccacccggacaagcaggcccgcgagcaggcggtggaggaggtcaagaag
gccgccctggaggagctgctggccgagtttcccgagggcgagatggacatcaagcacgtg
ctggacgatgtgctcaaggagatcgtgcggcggcagatcctggaggaggggatccgcccc
gacggccgccggcctgatgagatccgacccatccacgtggaggtcggcctgttgccgcgg
gcccacggctcgggcctcttccagcgcgggcagacccaggtgctgaccgtcgcctccctg
ggcgcccccggggaccggcagatgctggacaccctgggccagatcgaggagttcaagcga
tacatgcaccactacaacttcccgccctacagcaccggcgaggtggcgccgctgcgggcc
ccgagccggcgggagatcggccacggcgcgttggcggagcgggcactggtgccggttctt
cccgacgagttggagttcccctacaccatccggctggtctccgaggtgctcagctccaac
ggctccacctccatggccagcacctgcggcagcaccctggcgctgatggacgccggcgtg
ccgatcaaggcgccggtggccggcgtggccatgggcctgatcaaggaaggcgaccgcttc
gtcgtgctgacggacatccagggcatcgaggaccagctgggcgacatggacttcaaggtc
gccggcacccgcgagggcgtcacggcgatccagatggacatcaagatcgccggcgtcgac
cgcgcggtgctggagaaggccctggagcaggcgcgggtcgggcggctccacatcctggag
aagatgctggcggtcatcgacaagccgcggcccgagctgtcgccctacgcgccgcggatc
atcatcatgcagatcccggtggagaagatccgcgaggtcatcgggcccggcggccgcatc
gtcaaccgcatcgccgacgagtgcggcgtcaagatcgacatcgaggacgacggcaaggtc
tacatctccgcccagacccagcagggcggccagaaggccaaggagtggatcgagcagatc
gtcgccgacgtggaggtgggcagcgtctacctgggcaaggtgacgcggctcatgagcttc
ggcgccttcgtcgagatcctgccggggaaggaagggctcgtgcacgtgtcccggctggcg
ccgcagcgggtgcccagggtggaggacatggtgcgccccggggacaccgtcctggtcaag
gtcgtcgagatcgacgacctcgggcgggtcaacctctcccgcaaggacgcgctggcggag
cagccggagaagcggcacatggagcagttgagcggaccccgggcccacgacttcgaccag
cccgtgccggtgggcggtggccgccgcggtgccgcgggccacaacgggcgacccggcggg
ccgggtccccgcgggcgacggcgccgctag
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