Thermomonas sp. HDW16: G7079_00555
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Entry
G7079_00555 CDS
T06498
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
theh
Thermomonas sp. HDW16
Brite
KEGG Orthology (KO) [BR:
theh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
theh03021
]
G7079_00555 (rpoH)
Transcription machinery [BR:
theh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G7079_00555 (rpoH)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
IF2_N
HTH_11
Phage_terminase
HTH_10
GntR
UCR_14kD
DUF7645
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
QIL21642
UniProt:
A0A6G7ZY50
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All DBs
Position
complement(119164..120030)
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AA seq
288 aa
AA seq
DB search
MSQALVANNLPIPSTLGSMEAYIGAVHQIPVLSVEDEQRLARRLREDNDIAAAQELILSH
LRFVIHVARGYSGYGLQLGDLVQEGNIGLMKAVKRFDPTVGVRLVSFAVHWIRAEMHEYI
IKNWRIVKVATTKAQRKLFFNLRKSKKRLGWLSAAEVSAVAKDLNVSEREVLEMESRLSG
RDIGFDAPDDADDDHAPPAPANYLVANNDVDPAEAYESADSEDNQLELLREGMAKLDERS
RDIIKRRWLDADSKVTLQELADEYGVSAERIRQVEANALKKMKALFAA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagcattggtcgccaacaacctgccgatcccgagcacgctcggttcgatggag
gcgtacatcggtgccgtgcaccagatcccggtgctgtccgtcgaggacgagcagcgcctc
gcgcgtcgcctgcgcgaagacaacgacatcgccgcggcgcaggaactgatcctgtcgcac
ctgcgtttcgtcatccacgtcgcccgcggttacagcggctacggcctgcagctgggcgac
ctggtgcaggaaggcaatatcggcctgatgaaggcggtgaagcgcttcgaccccacggtc
ggcgtgcgcctggtcagctttgcggtgcactggattcgtgcggagatgcacgaatacatc
atcaagaactggcgcatcgtgaaagtcgccaccaccaaggcgcagcgcaagctgtttttc
aacctgcgcaagagcaagaagcgcctgggttggttgagtgcggccgaagtcagtgcggtg
gcgaaggacctcaacgtcagcgaacgcgaagtgctggaaatggaatcgcgcctgtccggt
cgcgacatcggtttcgatgcgccggatgatgccgacgacgaccacgccccgccggcaccg
gccaactacctcgtcgcaaacaatgacgtggacccggccgaagcctacgaatccgccgac
agcgaagacaaccagctggagctgctgcgcgaaggcatggccaagctcgatgagcgttcg
cgcgacatcatcaagcgccgctggctggatgccgacagcaaggtgaccctgcaggaactg
gccgacgaatacggcgtctccgccgaacgcattcgccaggtcgaggcgaatgcgctgaag
aagatgaaggcgttgttcgcggcgtaa
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