Thermomonas sp. HDW16: G7079_01025
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Entry
G7079_01025 CDS
T06498
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
theh
Thermomonas sp. HDW16
Pathway
theh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
theh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
G7079_01025 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
theh03400
]
G7079_01025 (recB)
Enzymes [BR:
theh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
G7079_01025 (recB)
DNA repair and recombination proteins [BR:
theh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G7079_01025 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_22
RtcB
TSP_NTD
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
QIL19428
UniProt:
A0A6G7ZRQ7
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All DBs
Position
complement(234416..238009)
Genome browser
AA seq
1197 aa
AA seq
DB search
MSAPRDPYLDLPLHGIRLIEASAGTGKTYTLATLVTRLVVERGLRIGQILAVTFTEAATQ
ELRKRIRERLQLTLDLLDAPVIENESAEAVLTRQLLQTHRQRSDESDDALRRRLRQATLE
IDLAAIFTIHGFCARVLREHALESGHGFDAPELLANDDDLRAELAADLWRSHAQDATAAE
DLGALWPNHEALADDLRVLLREPLLLPADAPLPPDPKPALLAAGAALADVYQEHGDVFFG
DLLAAVQGKVLNGNSYRPAWINALWQQLSTWSEAGDFATPLDERIARLTATAMQAKANKG
KDAQLPNSPMSAQIDAYIEAVHAQDEYARLRRAALLHRIRDDARHRLAVLKQQRRLQTYD
DLIDGVADALEGAEGDVLAQRLREQYRVALVDEFQDTDARQWAIFDRVFGSGSDDPALFL
IGDPKQAIYGFRGGDVHTYLHAAGIAERAPPLSHNFRSRPAVLTAIAALYKQAGDAAFID
QRIEFREVDAGGKCADADFQRNGVSAPAATVWQAPAPKADDKGKLKPWSAGRARELATQA
CVAAIHAVLSDARAGNAQIDGKPVQPGDIAVLVRSHREATMIQQALALVGIAAVAAGKQS
LFATGEARDLHALLLALLHSGDDGRLRAALSTVLVGVDALGIDRLETDADAHRDWQQRAM
AWRERLLRGGPLALVSDLAAVNAERLLGLLDGERRMSNYLQLAELLQEAQANALGLHGLV
DWLGQHIASADSNDETQLLRLESDARRVQIVTLHKSKGLEYPLVFLPFVGIGRNEASPGR
SCVVHDAEDGRRLQWKLGAADDWEVAKTAWQAEQRAEDARLLYVGLTRAEHALWLASGLF
FAHDKTPLHAMLGDAEALAAAGIVFDDNTPPSLPRLPAESDAAIPPARNVNRRLTHDWWV
YSFSQLAKADAGTETATETASAATLPASGGNDEPELGEDAPIDTEFDPRFAGNRYGVALH
AALENADFAAWHEWKPGDAAPNEEATVIANALGKEGYGAELLDDGIALTTQLIGQTLTVE
LPEAVRLCDVPASERRAEIEFQFSLRPTQVDALLQLLHKHDVVRERHGFGLRQKLEGLMT
GLIDLTYRHAGRWYVLDYKSNRLPAYDAASLQRAMAHSEYDLQALIYTLALHRWLRFRLG
SAYDYARDFGGIRYLFCRGLDASRNDSPGIHAQRFTPELVGALDVLFGHGDAEGAAA
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgccccgcgatccgtatctcgacctgccgctgcacggcatccgcctgatcgaa
gccagcgccggcaccggcaagacctacaccttggccacgctggtcacgcgcctggtggtc
gaacgcgggctacgcatcggccagatcctcgccgtcacgtttaccgaagcggcaacgcag
gaactacgcaagcgcatccgcgagcgcctgcaattgacgctcgacctgctcgatgcgccg
gtcatcgaaaacgaaagcgcggaagccgtgctcactcggcagttgctgcagacgcatcgc
caacgcagcgacgaaagcgatgacgccctgcgtcgccgcctgcgacaggccacgctggag
atcgacctggccgcaatcttcacgatccacggcttctgcgcgcgtgtgctgcgcgaacac
gcgctggaatccggtcacggtttcgatgcgccggaactgttggcgaatgatgacgacctg
cgtgccgagctcgccgccgacctgtggcgcagccatgcgcaggatgcgactgcggcagaa
gacctcggcgcgttatggcccaaccacgaagcgctggccgatgacctgcgcgtgctgctg
cgcgagccgctgttgctgccggcagacgcgccgttgccgcccgatccaaaaccggcattg
ctcgcagcaggcgctgcactggcggatgtttaccaagaacacggcgacgtcttctttggc
gatctgttggcggcggtgcaaggcaaggtgctcaacggcaacagctatcgcccagcatgg
atcaatgcgctctggcagcagttgagcacatggagcgaggccggcgacttcgccaccccg
ttggacgaacgcatcgccaggctcactgccactgcgatgcaagccaaggccaacaagggc
aaggacgcgcagctgccgaattcgccgatgagcgcgcagatcgacgcgtatatcgaagcg
gtgcacgcgcaggacgagtacgcccgcctgcgtcgcgcggccctgctgcatcgtatccgc
gatgacgcgcgccatcgcctggccgtgctcaagcagcaacgtcgcctgcaaacctatgac
gacctgatcgatggcgtggccgatgcgctggaaggcgcggagggcgatgtgttggcgcag
cgcctgcgcgagcaataccgcgtcgcgctggtcgacgaattccaggacaccgatgcgcgc
caatgggcgatcttcgaccgcgtgttcggcagcggcagcgatgatcccgcgttgttcctg
atcggcgatcccaagcaggcgatctacggcttccgtggcggcgatgtgcacacctatctg
catgccgccggcatcgccgaacgagcaccgccgctgtcgcacaacttccgttcgcggccc
gctgtgctcacggccatcgcggcgctgtacaagcaggccggcgatgcggccttcatcgac
caacgcatcgagttccgagaagtcgatgccggcggcaagtgcgccgatgccgatttccag
cgcaatggcgtgtccgcacccgcggccaccgtgtggcaggcacccgcgccgaaagcggac
gacaagggcaagctgaagccatggagcgccgggcgtgcgcgcgaactcgccacgcaggcc
tgcgtggccgccatccacgccgtgctgtccgatgcacgcgccggcaacgcgcagatcgat
ggcaagccggtgcaacccggcgatatcgccgtgctggtgcgttcgcatcgcgaggcgacg
atgatccagcaggcattggcgctggtcggcatcgccgccgtcgctgccggcaagcagagc
ctgttcgccaccggtgaagcgcgtgacctgcacgcgctgctgctggcgctcttgcacagc
ggcgatgacggccgcctgcgcgcggcgttgtccaccgtattggtcggcgtcgatgcgctc
ggcatcgaccgattggagaccgatgccgacgcccaccgcgattggcagcaacgcgcgatg
gcctggcgcgaacgcctgctgcgcggcggcccgctcgcactggtgagcgatctcgcggcg
gtcaacgccgaacgcctgctcggcctgctcgatggcgaacgccgcatgagcaattacctg
cagctggccgaactgttgcaggaagcgcaggcgaatgcgcttggcctgcacgggctggtg
gactggctgggccaacacatcgccagcgccgacagcaacgatgaaacgcaactgctgcgg
ctggaatccgatgcgcgtcgcgtgcagatcgtcaccctgcacaagagcaagggcctggaa
tatccgctggttttcctgccctttgtcggcatcggccgcaacgaggcttcgcccggtcgc
agctgcgtggtgcacgacgcagaagatggccgccgcctgcagtggaaactgggtgcagcg
gatgattgggaggtcgccaagaccgcatggcaggccgaacaacgtgccgaagacgcgcga
ctgctctacgtcggcctgacccgcgccgaacatgcgctgtggctcgccagcggcctgttc
ttcgcacacgacaagaccccgctgcacgcgatgctgggcgatgccgaagcactcgctgct
gccggcatcgtgttcgacgacaacacgccgccatcactgccgcgcctgcccgccgaatcc
gatgccgccatcccgcccgcgcgcaacgtcaaccgccggctcacgcacgactggtgggtg
tacagcttcagccagttggccaaggccgatgccggcaccgagaccgccacggaaaccgcc
agcgccgccaccctgccggcgagcggcggcaacgacgaacccgaactcggcgaagacgcg
cccatcgacaccgaattcgatccgcgcttcgccggcaatcgctacggcgtagccctgcac
gccgcgctggaaaacgcggacttcgccgcatggcatgaatggaaaccgggcgatgccgca
ccgaacgaggaagcgacggtcatcgccaacgcgctcggcaaggaaggctacggcgcggag
ctgctggacgacggcatcgcgctgaccacgcaactcattgggcagacgctgaccgtcgaa
ctgccggaagccgtgcgcctgtgcgatgtgccggccagcgaacgccgcgcggaaatcgaa
ttccagttctcgctgcggcccacgcaagtggatgcgctgctgcaactgctgcacaaacac
gatgtggtgcgcgagcgccacggcttcggcctgcgccagaaactggaaggcctgatgacc
ggcctgatcgatctcacctaccggcacgctggccggtggtacgtactcgactacaaatcc
aatcgcctgcccgcctatgacgccgccagcctgcaacgcgcgatggcgcacagcgaatac
gacctgcaggcgttgatctacaccctggccctgcatcgctggctgcgcttccgcctgggc
agcgcatacgactacgcccgcgatttcggcggcatccgctacctgttctgtcgtggtctg
gacgccagccgcaacgattcacccggtatccacgcgcaacgcttcacgccggaactggtg
ggtgcattggatgtactgttcggccacggtgatgccgaaggagctgcggcatga
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