Thermomonas sp. HDW16: G7079_09475
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Entry
G7079_09475 CDS
T06498
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
theh
Thermomonas sp. HDW16
Brite
KEGG Orthology (KO) [BR:
theh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
theh03016
]
G7079_09475 (rnd)
Enzymes [BR:
theh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
G7079_09475 (rnd)
Transfer RNA biogenesis [BR:
theh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
G7079_09475 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QIL20950
UniProt:
A0A6G7ZVW6
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All DBs
Position
2040480..2041589
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AA seq
369 aa
AA seq
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MTQWIDSPDALRARIANPPESIGLDTEFIRERTYWPQLALVQIALGEAEDDILLVDPLVP
GMCDALAPLLANPSVLKIMHSASEDLVAFKHACGVLPAPMFDTQIAAALASVGGGMGYQK
LVQAITGVALAKGETRSDWLRRPLSASQLEYAADDVRHLHALHRHLDATLATQNRTGWLQ
EDCARLLATVADDQGERWPHLSLRSAQFLDRDGQLRLLRLLRWRETYARRSDRPRSWILD
NELAFALARAARAAHADVQAILDATPKAPRSLGGAMFEAISTPLADEAEAPVARGDDRDK
KQLRALQEAVAAAAAELGLPEGLLASRRLLEALQDGGGWTGPLAGWRRCILQPRLTPLLT
AGDPAAASV
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgacacagtggatcgacagccccgacgcgctgcgtgcgcgcatcgccaacccacccgaa
agcatcgggctggataccgaattcatccgcgagcgcacctactggccgcaactggcgttg
gtgcagatcgcgctgggtgaagccgaagacgacatcctgctggtcgacccgctggtaccg
ggcatgtgcgacgcattggcgccattgctggccaacccgtcggtgctgaagatcatgcac
agcgccagcgaagatctggtggcgttcaagcatgcctgcggcgtactgccggcgccgatg
ttcgacacccagatcgcagcggcgctggccagcgtcggcggcggcatggggtaccagaaa
ctggtgcaggcgatcaccggggtggcgctggccaagggcgagacccgctccgactggttg
cgccggccattgtccgcatctcaactcgagtacgccgcggatgacgtgcgccacctgcat
gccttgcaccggcatctcgacgcgacactcgccacgcaaaaccgtactgggtggctgcag
gaggattgcgcgcgcctgctggccacggtagccgacgaccagggcgaacgctggccgcat
ctctcgctgcgcagcgcgcagttcctcgatcgtgacgggcaactgcgcttgttgcgcctg
ctacgctggcgcgaaacctacgcacgtcgcagcgaccgcccgcgcagctggatcctggac
aacgaactggcgttcgccctcgcgcgcgcggcgcgcgcggcgcatgccgacgtacaggcg
atcctcgacgccactccgaaagcgccgcgcagcctgggcggggcgatgttcgaggcgatc
tccaccccgctggcggatgaggccgaggcgccggttgcacgtggcgacgaccgcgacaag
aagcagttgcgcgcattgcaggaagccgtggccgcggcggcggcggaactcggcctgccc
gagggcctgttggcttcacgccgcctgctggaagccttgcaggatggtggtggctggact
ggcccactggcaggctggcggcgctgcatcctgcagccgcgcctgacgcccctgctcacg
gctggcgacccggcggcggcatccgtataa
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